PubMed

Clustered alignments of gene-expression time series data.

Smith AA, Vollrath A, Bradfield CA, Craven M.

Bioinformatics. 2009 Jun 15;25(12):i119-27.PMID: 19477977 [PubMed - indexed for MEDLINE]Related articlesFree article

Similarity queries for temporal toxicogenomic expression profiles.

Smith AA, Vollrath A, Bradfield CA, Craven M.

PLoS Comput Biol. 2008 Jul 18;4(7):e1000116. Erratum in: PLoS Comput Biol. 2008 Dec;4(12). doi.org//10.1371/annotation/48ea9acf-4422-4792-b9a6-565de3e64f60. PMID: 18636114 [PubMed - indexed for MEDLINE]Related articlesFree article

Fast multisegment alignments for temporal expression profiles.

Smith AA, Craven M.

Comput Syst Bioinformatics Conf. 2008;7:315-26.PMID: 19642291 [PubMed - indexed for MEDLINE]Related articlesFree article

A specialized learner for inferring structured cis-regulatory modules.

Noto K, Craven M.

BMC Bioinformatics. 2006 Dec 5;7:528.PMID: 17147812 [PubMed - indexed for MEDLINE]Related articlesFree article

A self-tuning method for one-chip SNP identification.

Molla M, Shavlik J, Richmond T, Smith S.

Proc IEEE Comput Syst Bioinform Conf. 2004:69-79.PMID: 16448001 [PubMed - indexed for MEDLINE]Related articles

Learning statistical models for annotating proteins with function information using biomedical text.

Ray S, Craven M.

BMC Bioinformatics. 2005;6 Suppl 1:S18. Epub 2005 May 24.PMID: 15960830 [PubMed - indexed for MEDLINE]Related articlesFree article

ABNER: an open source tool for automatically tagging genes, proteins and other entity names in text.

Settles B.

Bioinformatics. 2005 Jul 15;21(14):3191-2. Epub 2005 Apr 28.PMID: 15860559 [PubMed - indexed for MEDLINE]Related articlesFree article

Predicting bacterial transcription units using sequence and expression data.

Bockhorst J, Qiu Y, Glasner J, Liu M, Blattner F, Craven M.

Bioinformatics. 2003;19 Suppl 1:i34-43.PMID: 12855435 [PubMed - indexed for MEDLINE]Related articlesFree article

A Bayesian network approach to operon prediction.

Bockhorst J, Craven M, Page D, Shavlik J, Glasner J.

Bioinformatics. 2003 Jul 1;19(10):1227-35.PMID: 12835266 [PubMed - indexed for MEDLINE]Related articlesFree article

Evaluating machine learning approaches for aiding probe selection for gene-expression arrays.

Tobler JB, Molla MN, Nuwaysir EF, Green RD, Shavlik JW.

Bioinformatics. 2002;18 Suppl 1:S164-71.PMID: 12169544 [PubMed - indexed for MEDLINE]Related articlesFree article