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Sequence physical properties encode the global organization of protein structure space.
Rackovsky S.
Proc Natl Acad Sci U S A. 2009 Aug 25;106(34):14345-8. Epub 2009 Aug 12.PMID: 19706520 [PubMed - indexed for MEDLINE]Related articles
Information and discrimination in pairwise contact potentials.
Solis AD, Rackovsky S.
Proteins. 2008 May 15;71(3):1071-87.PMID: 18004788 [PubMed - indexed for MEDLINE]Related articles
Property-based sequence representations do not adequately encode local protein folding information.
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Comparative computational analysis of prion proteins reveals two fragments with unusual structural properties and a pattern of increase in hydrophobicity associated with disease-promoting mutations.
Kuznetsov IB, Rackovsky S.
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Similarity between the C-terminal domain of the prion protein and chimpanzee cytomegalovirus glycoprotein UL9.
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Class-specific correlations between protein folding rate, structure-derived, and sequence-derived descriptors.
Proteins. 2004 Feb 1;54(2):333-41.PMID: 14696195 [PubMed - indexed for MEDLINE]Related articles
On the properties and sequence context of structurally ambivalent fragments in proteins.
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Discriminative ability with respect to amino acid types: assessing the performance of knowledge-based potentials without threading.
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Optimally informative backbone structural propensities in proteins.
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Protein Sci. 2004 Dec; 13(12):3230-44.
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