Transcriptional Changes during Naturally Acquired Zika Virus Infection Render Dendritic Cells Highly Conducive to Viral Replication

Cell Rep. 2017 Dec 19;21(12):3471-3482. doi: 10.1016/j.celrep.2017.11.087.

Abstract

Although dendritic cells are among the human cell population best equipped for cell-intrinsic antiviral immune defense, they seem highly susceptible to infection with the Zika virus (ZIKV). Using highly purified myeloid dendritic cells isolated from individuals with naturally acquired acute infection, we here show that ZIKV induces profound perturbations of transcriptional signatures relative to healthy donors. Interestingly, we noted a remarkable downregulation of antiviral interferon-stimulated genes and innate immune sensors, suggesting that ZIKV can actively suppress interferon-dependent immune responses. In contrast, several host factors known to support ZIKV infection were strongly upregulated during natural ZIKV infection; these transcripts included AXL, the main entry receptor for ZIKV; SOCS3, a negative regulator of ISG expression; and IDO-1, a recognized inducer of regulatory T cell responses. Thus, during in vivo infection, ZIKV can transform the transcriptome of dendritic cells in favor of the virus to render these cells highly conducive to ZIKV infection.

Keywords: AXL; IDO-1; RNA-seq; SOCS3; Zika virus; acute infection; dendritic cells; flavivirus; interferon stimulated genes.

MeSH terms

  • Adult
  • Axl Receptor Tyrosine Kinase
  • Cell Line
  • Cells, Cultured
  • Dendritic Cells / metabolism*
  • Dendritic Cells / virology
  • Female
  • Humans
  • Indoleamine-Pyrrole 2,3,-Dioxygenase / genetics
  • Indoleamine-Pyrrole 2,3,-Dioxygenase / metabolism
  • Proto-Oncogene Proteins / genetics
  • Proto-Oncogene Proteins / metabolism
  • Receptor Protein-Tyrosine Kinases / genetics
  • Receptor Protein-Tyrosine Kinases / metabolism
  • Suppressor of Cytokine Signaling 3 Protein / genetics
  • Suppressor of Cytokine Signaling 3 Protein / metabolism
  • Transcriptome*
  • Virus Replication*
  • Zika Virus / physiology
  • Zika Virus Infection / genetics
  • Zika Virus Infection / metabolism*

Substances

  • IDO1 protein, human
  • Indoleamine-Pyrrole 2,3,-Dioxygenase
  • Proto-Oncogene Proteins
  • SOCS3 protein, human
  • Suppressor of Cytokine Signaling 3 Protein
  • Receptor Protein-Tyrosine Kinases
  • Axl Receptor Tyrosine Kinase