PubMed

Using decision forest to classify prostate cancer samples on the basis of SELDI-TOF MS data: assessing chance correlation and prediction confidence.

Tong W, Xie Q, Hong H, Shi L, Fang H, Perkins R, Petricoin EF.

Environ Health Perspect. 2004 Nov;112(16):1622-7.PMID: 15598613 [PubMed - indexed for MEDLINE]Related articlesFree article

A robust meta-classification strategy for cancer detection from MS data.

Bhanot G, Alexe G, Venkataraghavan B, Levine AJ.

Proteomics. 2006 Jan;6(2):592-604.PMID: 16342141 [PubMed - indexed for MEDLINE]Related articles

Quality control and quality assessment of data from surface-enhanced laser desorption/ionization (SELDI) time-of flight (TOF) mass spectrometry (MS).

Hong H, Dragan Y, Epstein J, Teitel C, Chen B, Xie Q, Fang H, Shi L, Perkins R, Tong W.

BMC Bioinformatics. 2005 Jul 15;6 Suppl 2:S5.PMID: 16026602 [PubMed - indexed for MEDLINE]Related articlesFree article

Application of serum protein fingerprinting coupled with artificial neural network model in diagnosis of hepatocellular carcinoma.

Wang JX, Zhang B, Yu JK, Liu J, Yang MQ, Zheng S.

Chin Med J (Engl). 2005 Aug 5;118(15):1278-84.PMID: 16117882 [PubMed - indexed for MEDLINE]Related articlesFree article

Evaluation of serum protein profiling by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry for the detection of prostate cancer: I. Assessment of platform reproducibility.

Semmes OJ, Feng Z, Adam BL, Banez LL, Bigbee WL, Campos D, Cazares LH, Chan DW, Grizzle WE, Izbicka E, Kagan J, Malik G, McLerran D, Moul JW, Partin A, Prasanna P, Rosenzweig J, Sokoll LJ, Srivastava S, Srivastava S, Thompson I, Welsh MJ, White N, Winget M, Yasui Y, Zhang Z, Zhu L.

Clin Chem. 2005 Jan;51(1):102-12.PMID: 15613711 [PubMed - indexed for MEDLINE]Related articlesFree article

[The application of surface-enhanced laser desorption/ionization-time of flight-mass spectrometry in diagnosing dysplasia and chronic atrophic gastric-carditis in population with high risk of gastric-cardia adenocarcinoma]

Wang DC, Wang LD, Zheng S, Fan ZM, Li JL, Feng CW, Zhang YR, Liu B, Gao SS, He X.

Zhonghua Nei Ke Za Zhi. 2005 Aug;44(8):573-6. Chinese. PMID: 16194406 [PubMed - indexed for MEDLINE]Related articles

A data-analytic strategy for protein biomarker discovery: profiling of high-dimensional proteomic data for cancer detection.

Yasui Y, Pepe M, Thompson ML, Adam BL, Wright GL Jr, Qu Y, Potter JD, Winget M, Thornquist M, Feng Z.

Biostatistics. 2003 Jul;4(3):449-63.PMID: 12925511 [PubMed - indexed for MEDLINE]Related articlesFree article

Combination of SELDI-TOF-MS and data mining provides early-stage response prediction for rectal tumors undergoing multimodal neoadjuvant therapy.

Smith FM, Gallagher WM, Fox E, Stephens RB, Rexhepaj E, Petricoin EF 3rd, Liotta L, Kennedy MJ, Reynolds JV.

Ann Surg. 2007 Feb;245(2):259-66.PMID: 17245180 [PubMed - indexed for MEDLINE]Related articlesFree article

Identification of lung cancer patients by serum protein profiling using surface-enhanced laser desorption/ionization time-of-flight mass spectrometry.

Han KQ, Huang G, Gao CF, Wang XL, Ma B, Sun LQ, Wei ZJ.

Am J Clin Oncol. 2008 Apr;31(2):133-9.PMID: 18391596 [PubMed - indexed for MEDLINE]Related articles

Application of serum SELDI proteomic patterns in diagnosis of lung cancer.

Yang SY, Xiao XY, Zhang WG, Zhang LJ, Zhang W, Zhou B, Chen G, He DC.

BMC Cancer. 2005 Jul 20;5:83.PMID: 16029516 [PubMed - indexed for MEDLINE]Related articlesFree article

A serum proteomic pattern for the detection of colorectal adenocarcinoma using surface enhanced laser desorption and ionization mass spectrometry.

Liu XP, Shen J, Li ZF, Yan L, Gu J.

Cancer Invest. 2006 Dec;24(8):747-53.PMID: 17162557 [PubMed - indexed for MEDLINE]Related articles

Differential capture of serum proteins for expression profiling and biomarker discovery in pre- and posttreatment head and neck cancer samples.

Freed GL, Cazares LH, Fichandler CE, Fuller TW, Sawyer CA, Stack BC Jr, Schraff S, Semmes OJ, Wadsworth JT, Drake RR.

Laryngoscope. 2008 Jan;118(1):61-8.PMID: 18043497 [PubMed - indexed for MEDLINE]Related articles

Surface-enhanced laser desorption/ionization time-of-flight mass spectrometry (SELDI-TOF MS) for determining prognosis in advanced stage hormone relapsing prostate cancer.

Kohli M, Siegel E, Bhattacharya S, Khan MA, Shah R, Suva LJ.

Cancer Biomark. 2006;2(6):249-58.PMID: 17264396 [PubMed - indexed for MEDLINE]Related articles

[Surface enhanced laser desorption/ionization time-of-flight mass spectrometry profiling of serum in detection of laryngeal squamous cell carcinoma and the progression to lymph node metastasis]

Cheng L, Zhou L, Tao L, Zhang M, Cui JF, Liu YK.

Zhonghua Yi Xue Za Zhi. 2007 Sep 25;87(36):2526-30. Chinese. PMID: 18067823 [PubMed - indexed for MEDLINE]Related articles

SELDI-TOF MS versus prostate specific antigen analysis of prospective plasma samples in a nested case-control study of prostate cancer.

Skytt A, Thysell E, Stattin P, Stenman UH, Antti H, Wikström P.

Int J Cancer. 2007 Aug 1;121(3):615-20.PMID: 17410539 [PubMed - indexed for MEDLINE]Related articles

Identification of protein biomarkers in Dupuytren's contracture using surface enhanced laser desorption ionization time-of-flight mass spectrometry (SELDI-TOF-MS).

O'Gorman D, Howard JC, Varallo VM, Cadieux P, Bowley E, McLean K, Pak BJ, Gan BS.

Clin Invest Med. 2006 Jun;29(3):136-45.PMID: 17058431 [PubMed - indexed for MEDLINE]Related articles

Proteomic data analysis workflow for discovery of candidate biomarker peaks predictive of clinical outcome for patients with acute myeloid leukemia.

Forshed J, Pernemalm M, Tan CS, Lindberg M, Kanter L, Pawitan Y, Lewensohn R, Stenke L, Lehtiö J.

J Proteome Res. 2008 Jun;7(6):2332-41. Epub 2008 May 2.PMID: 18452325 [PubMed - indexed for MEDLINE]Related articles

Application of surface-enhanced laser desorption/ionization time-of-flight-based serum proteomic array technique for the early diagnosis of prostate cancer.

Pan YZ, Xiao XY, Zhao D, Zhang L, Ji GY, Li Y, Yang BX, He DC, Zhao XJ.

Asian J Androl. 2006 Jan;8(1):45-51.PMID: 16372118 [PubMed - indexed for MEDLINE]Related articlesFree article

Diagnostic application of serum proteomic patterns in gastric cancer patients by ProteinChip surface-enhanced laser desorption/ionization time-of-flight mass spectrometry.

Lim JY, Cho JY, Paik YH, Chang YS, Kim HG.

Int J Biol Markers. 2007 Oct-Dec;22(4):281-6.PMID: 18161659 [PubMed - indexed for MEDLINE]Related articles

Boosted decision tree analysis of surface-enhanced laser desorption/ionization mass spectral serum profiles discriminates prostate cancer from noncancer patients.

Qu Y, Adam BL, Yasui Y, Ward MD, Cazares LH, Schellhammer PF, Feng Z, Semmes OJ, Wright GL Jr.

Clin Chem. 2002 Oct;48(10):1835-43.PMID: 12324514 [PubMed - indexed for MEDLINE]Related articlesFree article