PubMed

Toxicogenomics in risk assessment: an overview of an HESI collaborative research program.

Pennie W, Pettit SD, Lord PG.

Environ Health Perspect. 2004 Mar;112(4):417-9. Review.PMID: 15033589 [PubMed - indexed for MEDLINE]Related articlesFree article

Database development in toxicogenomics: issues and efforts.

Mattes WB, Pettit SD, Sansone SA, Bushel PR, Waters MD.

Environ Health Perspect. 2004 Mar;112(4):495-505. Review.PMID: 15033600 [PubMed - indexed for MEDLINE]Related articlesFree article

Toxicogenomic approach for assessing toxicant-related disease.

Waters MD, Olden K, Tennant RW.

Mutat Res. 2003 Nov;544(2-3):415-24. Review.PMID: 14644344 [PubMed - indexed for MEDLINE]Related articles

Overview on the application of transcription profiling using selected nephrotoxicants for toxicology assessment.

Kramer JA, Pettit SD, Amin RP, Bertram TA, Car B, Cunningham M, Curtiss SW, Davis JW, Kind C, Lawton M, Naciff JM, Oreffo V, Roman RJ, Sistare FD, Stevens J, Thompson K, Vickers AE, Wild S, Afshari CA.

Environ Health Perspect. 2004 Mar;112(4):460-4. Review.PMID: 15033596 [PubMed - indexed for MEDLINE]Related articlesFree article

Overview of an interlaboratory collaboration on evaluating the effects of model hepatotoxicants on hepatic gene expression.

Ulrich RG, Rockett JC, Gibson GG, Pettit SD.

Environ Health Perspect. 2004 Mar;112(4):423-7.PMID: 15033591 [PubMed - indexed for MEDLINE]Related articlesFree article

ArrayTrack--supporting toxicogenomic research at the U.S. Food and Drug Administration National Center for Toxicological Research.

Tong W, Cao X, Harris S, Sun H, Fang H, Fuscoe J, Harris A, Hong H, Xie Q, Perkins R, Shi L, Casciano D.

Environ Health Perspect. 2003 Nov;111(15):1819-26. Review.PMID: 14630514 [PubMed - indexed for MEDLINE]Related articlesFree article

Sources of variation in baseline gene expression levels from toxicogenomics study control animals across multiple laboratories.

Boedigheimer MJ, Wolfinger RD, Bass MB, Bushel PR, Chou JW, Cooper M, Corton JC, Fostel J, Hester S, Lee JS, Liu F, Liu J, Qian HR, Quackenbush J, Pettit S, Thompson KL.

BMC Genomics. 2008 Jun 12;9:285.PMID: 18549499 [PubMed - indexed for MEDLINE]Related articlesFree article

The use of toxicogenomic data in risk assessment: a regulatory perspective.

Chan VS, Theilade MD.

Clin Toxicol (Phila). 2005;43(2):121-6. Review.PMID: 15822767 [PubMed - indexed for MEDLINE]Related articles

Toxicogenomics through the eyes of informatics: conference overview and recommendations.

Olden K, Call N, Sobral B, Oakes R.

Environ Health Perspect. 2004 May;112(7):805-7.PMID: 15159210 [PubMed - indexed for MEDLINE]Related articlesFree article

[Toxicogenomics as a tool for evaluation of chemical effects]

Watanabe H.

Yakugaku Zasshi. 2007 Dec;127(12):1967-74. Review. Japanese. PMID: 18057786 [PubMed - indexed for MEDLINE]Related articlesFree article

Toxicogenomics in the assessment of immunotoxicity.

Baken KA, Vandebriel RJ, Pennings JL, Kleinjans JC, van Loveren H.

Methods. 2007 Jan;41(1):132-41. Review.PMID: 17161310 [PubMed - indexed for MEDLINE]Related articles

CEBS--Chemical Effects in Biological Systems: a public data repository integrating study design and toxicity data with microarray and proteomics data.

Waters M, Stasiewicz S, Merrick BA, Tomer K, Bushel P, Paules R, Stegman N, Nehls G, Yost KJ, Johnson CH, Gustafson SF, Xirasagar S, Xiao N, Huang CC, Boyer P, Chan DD, Pan Q, Gong H, Taylor J, Choi D, Rashid A, Ahmed A, Howle R, Selkirk J, Tennant R, Fostel J.

Nucleic Acids Res. 2008 Jan;36(Database issue):D892-900. Epub 2007 Oct 25.PMID: 17962311 [PubMed - indexed for MEDLINE]Related articlesFree article

EDGE: a centralized resource for the comparison, analysis, and distribution of toxicogenomic information.

Hayes KR, Vollrath AL, Zastrow GM, McMillan BJ, Craven M, Jovanovich S, Rank DR, Penn S, Walisser JA, Reddy JK, Thomas RS, Bradfield CA.

Mol Pharmacol. 2005 Apr;67(4):1360-8. Epub 2005 Jan 20.PMID: 15662043 [PubMed - indexed for MEDLINE]Related articlesFree article

Predicting future human and environmental health challenges: the Health and Environmental Sciences Institute's scientific mapping exercise.

Smith LL, Brent RL, Cohen SM, Doerrer NG, Goodman JI, Greim H, Holsapple MP, Lightfoot RM.

Crit Rev Toxicol. 2008;38(10):817-45. Review.PMID: 18853291 [PubMed - indexed for MEDLINE]Related articles

Toxicogenomics in the pharmaceutical industry: hollow promises or real benefit?

Lühe A, Suter L, Ruepp S, Singer T, Weiser T, Albertini S.

Mutat Res. 2005 Aug 4;575(1-2):102-15. Epub 2005 Apr 25. Review.PMID: 15924886 [PubMed - indexed for MEDLINE]Related articles

Clofibrate-induced gene expression changes in rat liver: a cross-laboratory analysis using membrane cDNA arrays.

Baker VA, Harries HM, Waring JF, Duggan CM, Ni HA, Jolly RA, Yoon LW, De Souza AT, Schmid JE, Brown RH, Ulrich RG, Rockett JC.

Environ Health Perspect. 2004 Mar;112(4):428-38.PMID: 15033592 [PubMed - indexed for MEDLINE]Related articlesFree article

Taking stock of toxicogenomics: mini-monograph offers overview.

Hood E.

Environ Health Perspect. 2004 Mar;112(4):A231. No abstract available. PMID: 15040318 [PubMed - indexed for MEDLINE]Related articlesFree article

Public consortium efforts in toxicogenomics.

Mattes WB.

Methods Mol Biol. 2008;460:221-38.PMID: 18449490 [PubMed - indexed for MEDLINE]Related articles

A retrospective analysis of toxicogenomics in the safety assessment of drug candidates.

Foster WR, Chen SJ, He A, Truong A, Bhaskaran V, Nelson DM, Dambach DM, Lehman-McKeeman LD, Car BD.

Toxicol Pathol. 2007;35(5):621-35. Review.PMID: 17654404 [PubMed - indexed for MEDLINE]Related articles

Utilization of a one-dimensional score for surveying chemical-induced changes in expression levels of multiple biomarker gene sets using a large-scale toxicogenomics database.

Kiyosawa N, Shiwaku K, Hirode M, Omura K, Uehara T, Shimizu T, Mizukawa Y, Miyagishima T, Ono A, Nagao T, Urushidani T.

J Toxicol Sci. 2006 Dec;31(5):433-48.PMID: 17202759 [PubMed - indexed for MEDLINE]Related articlesFree article