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1: | Environmental Adaptation: Genomic Analysis of the Piezotolerant and Psychrotolerant Deep-Sea Iron Reducing Bacterium Shewanella piezotolerans WP3 Fengping Wang, Jianbin Wang, Huahua Jian, Bing Zhang, Shengkang Li, Feng Wang, Xiaowei Zeng, Lei Gao, Douglas Hoyt Bartlett, Jun Yu, Songnian Hu, and Xiang Xiao PLoS ONE. 2008; 3(4): e1937. Published online 2008 April 9. doi: 10.1371/journal.pone.0001937.PMCID: PMC2276687 | |
2: | Comparative genomics of the FtsK–HerA superfamily of pumping ATPases: implications for the origins of chromosome segregation, cell division and viral capsid packaging Lakshminarayan M. Iyer, Kira S. Makarova, Eugene V. Koonin, and L. Aravind Nucleic Acids Res. 2004; 32(17): 5260–5279. Published online 2004 October 5. doi: 10.1093/nar/gkh828.PMCID: PMC521647 | |
3: | Filamentous phage as an immunogenic carrier to elicit focused antibody responses against a synthetic peptide N.E. van Houten, M.B. Zwick, A. Menendez, and J.K. Scott Vaccine. Author manuscript; available in PMC 2007 September 10.PMCID: PMC1974903 Published in final edited form as: Vaccine. 2006 May 8; 24(19): 4188–4200. Published online 2006 January 11. doi: 10.1016/j.vaccine.2006.01.001. | |
4: | Prophage Genomics Carlos Canchaya, Caroline Proux, Ghislain Fournous, Anne Bruttin, and Harald Brüssow Microbiol Mol Biol Rev. 2003 June; 67(2): 238–276. doi: 10.1128/MMBR.67.2.238-276.2003.PMCID: PMC156470 | |
5: | Genomic Sequence and Receptor for the Vibrio cholerae Phage KSF-1Φ: Evolutionary Divergence among Filamentous Vibriophages Mediating Lateral Gene Transfer Shah M. Faruque, Iftekhar Bin Naser, Kazutaka Fujihara, Pornphan Diraphat, Nityananda Chowdhury, M. Kamruzzaman, Firdausi Qadri, Shinji Yamasaki, A. N. Ghosh, and John J. Mekalanos J Bacteriol. 2005 June; 187(12): 4095–4103. doi: 10.1128/JB.187.12.4095-4103.2005.PMCID: PMC1151723 | |
6: | Molecular Detection and Genotyping of Male-Specific Coliphages by Reverse Transcription-PCR and Reverse Line Blot Hybridization Jan Vinjé, Sjon J. G. Oudejans, Jill R. Stewart, Mark D. Sobsey, and Sharon C. Long Appl Environ Microbiol. 2004 October; 70(10): 5996–6004. doi: 10.1128/AEM.70.10.5996-6004.2004.PMCID: PMC522105 | |
7: | Sensitive fluorescence detection of nucleic acids based on isothermal circular strand-displacement polymerization reaction Qiuping Guo, Xiaohai Yang, Kemin Wang, Weihong Tan, Wei Li, Hongxing Tang, and Huimin Li Nucleic Acids Res. 2009 February; 37(3): e20. Published online 2009 February. doi: 10.1093/nar/gkn1024.PMCID: PMC2647313 | |
8: | Characterization of a New Plasmid-Like Prophage in a Pandemic Vibrio parahaemolyticus O3:K6 Strain Shih-Feng Lan, Chung-Ho Huang, Chuan-Hsiung Chang, Wei-Chao Liao, I-Hsuan Lin, Wan-Neng Jian, Yueh-Gin Wu, Shau-Yan Chen, and Hin-chung Wong Appl Environ Microbiol. 2009 May; 75(9): 2659–2667. Published online 2009 March 13. doi: 10.1128/AEM.02483-08.PMCID: PMC2681713 | |
9: | VGJ ![[var phi]](/corehtml/pmc/pmcents/x03C6.gif) , a Novel Filamentous Phage of Vibrio cholerae, Integrates into the Same Chromosomal Site as CTX ![[var phi]](/corehtml/pmc/pmcents/x03C6.gif) Javier Campos, Eriel Martínez, Edith Suzarte, Boris L. Rodríguez, Karen Marrero, Yussuan Silva, Talena Ledón, Ricardo del Sol, and Rafael Fando J Bacteriol. 2003 October; 185(19): 5685–5696. doi: 10.1128/JB.185.19.5685-5696.2003.PMCID: PMC193952 | |
10: | Comprehensive viral oligonucleotide probe design using conserved protein regions Omar J. Jabado, Yang Liu, Sean Conlan, P. Lan Quan, Hédi Hegyi, Yves Lussier, Thomas Briese, Gustavo Palacios, and W. I. Lipkin Nucleic Acids Res. 2008 January; 36(1): e3. Published online 2008 January. doi: 10.1093/nar/gkm1106.PMCID: PMC2248741 | |
11: | Morphological evidence for phages in Xylella fastidiosa Jianchi Chen and Edwin L Civerolo Virol J. 2008; 5: 75. Published online 2008 June 6. doi: 10.1186/1743-422X-5-75.PMCID: PMC2430549 | |
12: | Assembly of Viral Metagenomes from Yellowstone Hot Springs Thomas Schoenfeld, Melodee Patterson, Paul M. Richardson, K. Eric Wommack, Mark Young, and David Mead Appl Environ Microbiol. 2008 July; 74(13): 4164–4174. Published online 2008 April 25. doi: 10.1128/AEM.02598-07.PMCID: PMC2446518 | |
13: | The Phage Proteomic Tree: a Genome-Based Taxonomy for Phage Forest Rohwer and Rob Edwards J Bacteriol. 2002 August; 184(16): 4529–4535. doi: 10.1128/JB.184.16.4529-4535.2002.PMCID: PMC135240 | |
14: | The mechanism by which molecules containing the HIV gp41 core-binding motif HXXNPF inhibit HIV-1 envelope glycoprotein-mediated syncytium formation Jing-He Huang, Heng-Wen Yang, Shuwen Liu, Jing Li, Shibo Jiang, and Ying-Hua Chen Biochem J. 2007 May 1; 403(Pt 3): 565–571. Prepublished online 2007 January 16. Published online 2007 April 12. doi: 10.1042/BJ20061275.PMCID: PMC1876390 | |
15: | Simple and Rapid F+ Coliphage Culture, Latex Agglutination, and Typing Assay To Detect and Source Track Fecal Contamination David C. Love and Mark D. Sobsey Appl Environ Microbiol. 2007 July; 73(13): 4110–4118. Published online 2007 May 4. doi: 10.1128/AEM.02546-06.PMCID: PMC1932791 | |
16: | Phage_Finder: Automated identification and classification of prophage regions in complete bacterial genome sequences Derrick E. Fouts Nucleic Acids Res. 2006 November; 34(20): 5839–5851. Published online 2006 October 24. doi: 10.1093/nar/gkl732.PMCID: PMC1635311 | |
17: | Phage Therapy – Everything Old is New Again Andrew M Kropinski Can J Infect Dis Med Microbiol. 2006 Sep–Oct; 17(5): 297–306. PMCID: PMC2095089 | |
18: | Solution structure of the DNA-binding domain of RPA from Saccharomyces cerevisiae and its interaction with single-stranded DNA and SV40 T antigen Chin-Ju Park, Joon-Hwa Lee, and Byong-Seok Choi Nucleic Acids Res. 2005; 33(13): 4172–4181. Published online 2005 July 25. doi: 10.1093/nar/gki736.PMCID: PMC1180672 | |
19: | Therapy of Experimental Pseudomonas Infections with a Nonreplicating Genetically Modified Phage Steven Hagens, André Habel, Uwe von Ahsen, Alexander von Gabain, and Udo Bläsi Antimicrob Agents Chemother. 2004 October; 48(10): 3817–3822. doi: 10.1128/AAC.48.10.3817-3822.2004.PMCID: PMC521880 | |
20: | Evaluation of F+ RNA and DNA Coliphages as Source-Specific Indicators of Fecal Contamination in Surface Waters Dana Cole, Sharon C. Long, and Mark D. Sobsey Appl Environ Microbiol. 2003 November; 69(11): 6507–6514. doi: 10.1128/AEM.69.11.6507-6514.2003.PMCID: PMC262259 | |
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