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1: HomoloGene:21002. Gene conserved in Coelomata Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   MED1,  Homo sapiens
mediator complex subunit 1
    NP_004765.2
1581 aa
Domain Image
   MED1,  Pan troglodytes
mediator complex subunit 1
    XP_001172395.1
1581 aa
Domain Image
   MED1,  Canis lupus familiaris
mediator complex subunit 1
    XP_537654.2
1583 aa
Domain Image
   MED1,  Bos taurus
mediator complex subunit 1
    XP_598984.2
1575 aa
Domain Image
   Med1,  Mus musculus
mediator complex subunit 1
    NP_001073587.1
1575 aa
Domain Image
   Med1,  Rattus norvegicus
mediator complex subunit 1
    XP_573188.1
1582 aa
   MED1,  Gallus gallus
mediator complex subunit 1
    XP_418125.2
1594 aa
Domain Image
   LOC571519,  Danio rerio
similar to Ppar binding protein
    XP_700209.3
1707 aa
Domain Image
   MED1,  Drosophila melanogaster
Mediator complex subunit 1
    NP_649341.1
1475 aa
Domain Image
   AgaP_AGAP012219,  Anopheles gambiae
AGAP012219-PA
    XP_320318.4
1753 aa
Domain Image


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenrate Alignments




Phenotypes
Phenotypic information for the genes in this entry imported from model organism databases.


  Mus musculus
 
Pigmentation phenotype.
 
Nervous system phenotype.
 
Muscle phenotype.
 
Liver/biliary system phenotype.
 
Limbs/digits/tail phenotype.
 
Lethality-prenatal/perinatal.
 
Homeostasis/metabolism phenotype.
 
Growth/size phenotype.
 
Endocrine/exocrine gland phenotype.
 
Embryogenesis phenotype.
 
Craniofacial phenotype.
 
Cellular phenotype.
 
Cardiovascular system phenotype. The observable morphological and physiological characteristics of the mammalian heart, blood vessels, or circulatory system that are manifested through development and lifespan.
 
Respiratory system phenotype.
 
Vision/eye phenotype.
 
Hematopoietic system phenotype.



PubMed
Articles associated with genes and sequences of this entry plus additional related articles.

 
Ndong Jde L, et al.
Down-regulation of the expression of RB18A/MED1, a cofactor of transcription, triggers strong tumorigenic phenotype of human melanoma cells. Int J Cancer 124, 2597-606(2009).
 
Howard JH, et al.
Epigenetic downregulation of the DNA repair gene MED1/MBD4 in colorectal and ovarian cancer. Cancer Biol Ther 8, 94-100(2009).
 
Belakavadi M, et al.
MED1 phosphorylation promotes its association with mediator: implications for nuclear receptor signaling. Mol Cell Biol 28, 3932-42(2008).
 
Matsumoto K, et al.
Critical role for transcription coactivator peroxisome proliferator-activated receptor (PPAR)-binding protein/TRAP220 in liver regeneration and PPARalpha ligand-induced liver tumor development. J Biol Chem 282, 17053-60(2007).
 
Li JM, et al.
Decreased expression of thyroid receptor-associated protein 220 in temporal lobe tissue of patients with refractory epilepsy. Biochem Biophys Res Commun 348, 1389-97(2006).
 

 


Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.

 
Med1-Trap220 (pfam10744)
  Mediator of RNA polymerase II transcription subunit 1.



Related Homology Resources
Links to curated and computed homology information found in other databases.

 
Orthology group for M.musculus Med1 includes H.sapiens MED1 and R.norvegicus Med1.



UniGene
Links to groups of transcribed sequences established by tblastn searching of UniGene.

 
Strain Liverpool
 
Similar to Mediator complex subunit 1 CG7162-PA
 
Mediator complex subunit 1
 
Mediator complex subunit 1
 
Zgc:111976
Hypothetical LOC571519
 
Mediator complex subunit 1
Mediator complex subunit 1
 
Mediator complex subunit 1
 
Transcribed locus, moderately similar to XP_700209.2 PREDICTED: hypothetical...
 
Mediator complex subunit 1
 
Testis cDNA, clone: QtsA-15747, similar to human PPAR binding protein (PPARB...
 
Peroxisome proliferator-activated receptor binding protein
 
Mediator complex subunit 1
 
Transcribed locus, strongly similar to NP_004765.2 mediator complex subunit ...
 
Mediator complex subunit 1
 
Similar to Peroxisome proliferator-activated receptor-binding protein (PBP) ...
 
Transcribed locus, strongly similar to NP_004765.2 mediator complex subunit ...
 
Transcribed locus, strongly similar to NP_004765.2 mediator complex subunit ...
 
Hypothetical protein LOC100036710
 
Mediator complex subunit 1
 
Hypothetical protein LOC443618
 
Mediator of RNA polymerase II transcription subunit 1