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1: HomoloGene:37437. Gene conserved in Bilateria Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   ABCA3,  Homo sapiens
ATP-binding cassette, sub-family A (ABC1), member 3
    NP_001080.2
1704 aa
Domain ImageDomain ImageDomain Image
   ABCA3,  Pan troglodytes
ATP-binding cassette, sub-family A (ABC1), member 3
    XP_510744.2
1704 aa
Domain ImageDomain ImageDomain Image
   ABCA3,  Canis lupus familiaris
ATP-binding cassette, sub-family A (ABC1), member 3
    XP_537004.2
1758 aa
Domain ImageDomain ImageDomain Image
   ABCA3,  Bos taurus
ATP-binding cassette, sub-family A (ABC1), member 3
    XP_001790255.1
1704 aa
Domain ImageDomain Image
   Abca3,  Mus musculus
ATP-binding cassette, sub-family A (ABC1), member 3
    NP_001034670.1
1704 aa
Domain ImageDomain ImageDomain Image
   Abca3,  Rattus norvegicus
ATP-binding cassette, sub-family A (ABC1), member 3
    XP_220219.4
1708 aa
Domain ImageDomain ImageDomain Image
   ABCA3,  Gallus gallus
ATP-binding cassette, sub-family A (ABC1), member 3
    XP_414701.2
1641 aa
Domain ImageDomain Image
   CG1718,  Drosophila melanogaster
CG1718
    NP_608445.1
1713 aa
Domain ImageDomain Image
   AgaP_AGAP012155,  Anopheles gambiae
AGAP012155-PA
    XP_320377.4
1710 aa
Domain ImageDomain Image
   AgaP_AGAP006380,  Anopheles gambiae
AGAP006380-PA
    XP_001688862.1
1652 aa
Domain ImageDomain Image
   AgaP_AGAP006379,  Anopheles gambiae
AGAP006379-PA
    XP_557048.3
1643 aa
Domain ImageDomain Image
   AgaP_AGAP007504,  Anopheles gambiae
AGAP007504-PA
    XP_308371.4
1719 aa
Domain ImageDomain Image
   AgaP_AGAP012156,  Anopheles gambiae
AGAP012156-PA
    XP_552044.3
1663 aa
Domain ImageDomain Image
   abt-4,  Caenorhabditis elegans
ABC Transporter family
    NP_503175.1
1802 aa
Domain ImageDomain ImageDomain Image


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenrate Alignments




Phenotypes
Phenotypic information for the genes in this entry imported from model organism databases.


  Homo sapiens
 
Surfactant metabolism dysfunction, pulmonary, 3.
 
Mus musculus
 
Renal/urinary system phenotype.
 
Lethality-prenatal/perinatal.
 
Homeostasis/metabolism phenotype.
 
Cardiovascular system phenotype. The observable morphological and physiological characteristics of the mammalian heart, blood vessels, or circulatory system that are manifested through development and lifespan.
 
Behavior/neurological phenotype. The observable actions or reactions of mammalian organisms that are manifested through development and lifespan.
 
Respiratory system phenotype.



PubMed
Articles associated with genes and sequences of this entry plus additional related articles.

 
Anandarajan M, et al.
ABCA3 Deficiency: an unusual cause of respiratory distress in the newborn. Ulster Med J 78, 51-2(2009).
 
Matsumura Y, et al.
Aberrant catalytic cycle and impaired lipid transport into intracellular vesicles in ABCA3 mutants associated with nonfatal pediatric interstitial lung disease. Am J Physiol Lung Cell Mol Physiol 295, L698-707(2008).
 
Shanklin DR, et al.
Cerebropulmonary dysgenetic syndrome. Exp Mol Pathol 85, 112-6(2008).
 
Chapuy B, et al.
Intracellular ABC transporter A3 confers multidrug resistance in leukemia cells by lysosomal drug sequestration. Leukemia 22, 1576-86(2008).
 
Karjalainen MK, et al.
Haplotype analysis of ABCA3: association with respiratory distress in very premature infants. Ann Med 40, 56-65(2008).
 

 


Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.

 
rim_protein (TIGR01257)
  retinal-specific rim ABC transporter.
 
P-loop NTPase (cl09099)
  P-loop containing Nucleoside Triphosphate Hydrolases.
 
ABC2_membrane (cl11417)
  ABC-2 type transporter.



Related Homology Resources
Links to curated and computed homology information found in other databases.

 
Orthology group for M.musculus Abca3 includes H.sapiens ABCA3 and R.norvegicus Abca3.



UniGene
Links to groups of transcribed sequences established by tblastn searching of UniGene.

 
Transcribed locus, weakly similar to XP_001377138.1 PREDICTED: similar to AT...
 
Transcribed locus, weakly similar to XP_693353.2 PREDICTED: hypothetical pro...
 
Transcribed locus, weakly similar to XP_001477700.1 PREDICTED: similar to AT...
 
Transcribed locus, moderately similar to XP_320377.4 AGAP012155-PA [Anophele...
 
Transcribed locus, weakly similar to XP_001477700.1 PREDICTED: similar to AT...
Strain Liverpool chromosome 2
Strain Liverpool chromosome 2
Strain Liverpool
 
Transcribed locus, moderately similar to XP_001688862.1 AGAP006380-PA [Anoph...
Transcribed locus, strongly similar to XP_557048.3 AGAP006379-PA [Anopheles ...
 
Transcribed locus, weakly similar to XP_001477700.1 PREDICTED: similar to AT...
 
Transcribed locus, weakly similar to XP_292468.5 PREDICTED: hypothetical pro...
 
ATP-binding cassette, sub-family A (ABC1), member 3
 
ABC Transporter family
 
ATP-binding cassette, sub-family A (ABC1), member 3
 
Hypothetical LOC564344
 
CG32186
 
CG31213
 
CG1718
 
CG1494
 
Transcribed locus, moderately similar to NP_608445.1 CG1718 CG1718-PA [Droso...
 
ATP-binding cassette, sub-family A (ABC1), member 3
 
Similar to ATP-binding cassette, sub-family A member 3
 
ATP-binding cassette, sub-family A (ABC1), member 3
 
ATP-binding cassette, sub-family A (ABC1), member 3
 
Similar to ENSANGP00000009155
 
ABC transporter family protein
 
Transcribed locus, weakly similar to XP_001477700.1 PREDICTED: similar to AT...
 
Transcribed locus, moderately similar to XP_001367846.1 PREDICTED: similar t...