1: HomoloGene:7917. Gene conserved in Coelomata Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

   RFX3,  Homo sapiens
regulatory factor X, 3 (influences HLA class II expression)
    NP_602304.1
749 aa
Domain ImageDomain Image
   RFX3,  Pan troglodytes
regulatory factor X, 3 (influences HLA class II expression)
    XP_520464.2
739 aa
Domain ImageDomain Image
   RFX3,  Canis lupus familiaris
regulatory factor X, 3 (influences HLA class II expression)
    XP_861070.1
757 aa
Domain ImageDomain Image
   RFX3,  Bos taurus
regulatory factor X, 3 (influences HLA class II expression)
    XP_618263.3
677 aa
Domain ImageDomain Image
   Rfx3,  Mus musculus
regulatory factor X, 3 (influences HLA class II expression)
    NP_035395.2
749 aa
Domain ImageDomain Image
   rfx3,  Danio rerio
regulatory factor X, 3 (influences HLA class II expression)
    NP_001073517.1
765 aa
Domain ImageDomain Image
   Rfx,  Drosophila melanogaster
Rfx, isoform A
    NP_649999.2
897 aa
Domain Image


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenrate Alignments




Phenotypes
Phenotypic information for the genes in this entry imported from model organism databases.


  Mus musculus
 
Normal phenotype.
 
Lethality-prenatal/perinatal.
 
Growth/size phenotype.
 
Embryogenesis phenotype.
 
Cardiovascular system phenotype. The observable morphological and physiological characteristics of the mammalian heart, blood vessels, or circulatory system that are manifested through development and lifespan.



PubMed
Articles associated with genes and sequences of this entry plus additional related articles.

 
El Zein L, et al.
RFX3 governs growth and beating efficiency of motile cilia in mouse and controls the expression of genes involved in human ciliopathies. J Cell Sci 122, 3180-9(2009).
 
Ait-Lounis A, et al.
Novel function of the ciliogenic transcription factor RFX3 in development of the endocrine pancreas. Diabetes 56, 950-9(2007).
 
Baas D, et al.
A deficiency in RFX3 causes hydrocephalus associated with abnormal differentiation of ependymal cells. Eur J Neurosci 24, 1020-30(2006).
 
Vandaele C, et al.
Drosophila regulatory factor X is an embryonic type I sensory neuron marker also expressed in spermatids and in the brain of Drosophila. Mech Dev 103, 159-62(2001).
 
Durand B, et al.
Cloning and characterization of dRFX, the Drosophila member of the RFX family of transcription factors. Gene 246, 285-93(2000).
 

 


Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.

 
RFX_DNA_binding (pfam02257)
  RFX DNA-binding domain.
 
RFX1_trans_act (pfam04589)
  RFX1 transcription activation region.



Related Homology Resources
Links to curated and computed homology information found in other databases.

 
Orthology group for M.musculus Rfx3 includes H.sapiens RFX3.



UniGene
Links to groups of transcribed sequences established by tblastn searching of UniGene.

 
Transcribed locus, moderately similar to XP_001116573.1 PREDICTED: similar t...
 
Similar to Rfx CG6312-PA
 
Regulatory factor X, 3 (influences HLA class II expression)
 
Regulatory factor X, 3 (influences HLA class II expression)
 
Zgc:153245
 
Rfx
 
Similar to Regulatory factor X, 3 (influences HLA class II expression)
 
Regulatory factor X, 3 (influences HLA class II expression)
 
Transcribed locus, weakly similar to XP_001845597.1 rfx transcription factor...
 
Testis cDNA clone: QtsA-12177, similar to human regulatory factor X, 3 (infl...
 
Similar to regulatory factor X3 isoform b
 
Regulatory factor X, 3 (influences HLA class II expression)
 
Regulatory factor X, 3 (influences HLA class II expression)
 
Transcribed locus, moderately similar to NP_001073517.1 hypothetical protein...
 
Regulatory factor X, 3 (influences HLA class II expression)
 
Regulatory factor X, 3 (influences HLA class II expression)