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    TULP4 TUB like protein 4 [ Sarcophilus harrisii (Tasmanian devil) ]

    Gene ID: 100923784, updated on 8-Mar-2024

    Summary

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    Gene symbol
    TULP4
    Gene description
    TUB like protein 4
    See related
    Ensembl:ENSSHAG00000006707
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sarcophilus harrisii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (132793646..133005002, complement)
    102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838977.1 (64318..277914)

    Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene dynein light chain Tctex-type 1 Neighboring gene transmembrane protein 181 Neighboring gene uncharacterized LOC116419128 Neighboring gene general transcription factor IIH subunit 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tubby-related protein 4
    Names
    tubby like protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mSarHar1.11 Primary Assembly

    Genomic

    1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

      Range
      132793646..133005002 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031937561.1 → XP_031793421.1  tubby-related protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A7N4NQ60, A0A7N4NQM2
      Related
      ENSSHAP00000026796.1, ENSSHAT00000042289.1
      Conserved Domains (3) summary
      COG2319
      Location:48 → 365
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:85 → 123
      7WD40; WD40 repeat [structural motif]
      pfam01167
      Location:1448 → 1518
      Tub; Tub family

    2. XM_031937559.1 → XP_031793419.1  tubby-related protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A7N4NPT0, A0A7N4NQM2
      Related
      ENSSHAP00000025430.1, ENSSHAT00000033682.1
      Conserved Domains (4) summary
      COG2319
      Location:67 → 217
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:85 → 123
      7WD40; WD40 repeat [structural motif]
      pfam01167
      Location:1493 → 1563
      Tub; Tub family
      cl02533
      Location:373 → 409
      SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...

    3. XM_031937560.1 → XP_031793420.1  tubby-related protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A7N4NPT0, A0A7N4NQM2
      Related
      ENSSHAP00000026432.1, ENSSHAT00000036249.1
      Conserved Domains (4) summary
      COG2319
      Location:67 → 217
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:85 → 123
      7WD40; WD40 repeat [structural motif]
      pfam01167
      Location:1493 → 1563
      Tub; Tub family
      cl02533
      Location:373 → 409
      SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...

    4. XM_031937563.1 → XP_031793423.1  tubby-related protein 4 isoform X3

      UniProtKB/TrEMBL
      G3VX17
      Related
      ENSSHAP00000007722.2, ENSSHAT00000007785.2
      Conserved Domains (2) summary
      pfam01167
      Location:1300 → 1370
      Tub; Tub family
      cl02533
      Location:180 → 216
      SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
    Nucleotide Protein
    Heading Accession and Version

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