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    TRERF1 transcriptional regulating factor 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100338909, updated on 8-Mar-2024

    Summary

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    Gene symbol
    TRERF1
    Gene description
    transcriptional regulating factor 1
    See related
    Ensembl:ENSOCUG00000016703
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See TRERF1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 12 NC_067385.1 (123763226..123992529)

    Chromosome 12 - NC_067385.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase Nek2-like Neighboring gene U6 spliceosomal RNA Neighboring gene transcription elongation factor A protein-like 8 Neighboring gene magnesium transporter NIPA2-like Neighboring gene mitochondrial ribosomal protein S10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067385.1 Chromosome 12 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of histone deacetylase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcriptional-regulating factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067385.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      123763226..123992529
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051855694.1 → XP_051711654.1  transcriptional-regulating factor 1 isoform X1

    2. XM_051855691.1 → XP_051711651.1  transcriptional-regulating factor 1 isoform X1

    3. XM_051855693.1 → XP_051711653.1  transcriptional-regulating factor 1 isoform X1

    4. XM_051855696.1 → XP_051711656.1  transcriptional-regulating factor 1 isoform X1

    5. XM_051855690.1 → XP_051711650.1  transcriptional-regulating factor 1 isoform X1

    6. XM_051855699.1 → XP_051711659.1  transcriptional-regulating factor 1 isoform X1

    7. XM_017345128.2 → XP_017200617.2  transcriptional-regulating factor 1 isoform X6

    8. XM_051855695.1 → XP_051711655.1  transcriptional-regulating factor 1 isoform X1

    9. XM_017345124.2 → XP_017200613.2  transcriptional-regulating factor 1 isoform X1

    10. XM_017345126.2 → XP_017200615.2  transcriptional-regulating factor 1 isoform X2

    11. XM_051855700.1 → XP_051711660.1  transcriptional-regulating factor 1 isoform X3

    12. XM_008262918.3 → XP_008261140.2  transcriptional-regulating factor 1 isoform X4

    13. XM_017345127.2 → XP_017200616.2  transcriptional-regulating factor 1 isoform X5

    14. XM_017345129.2 → XP_017200618.2  transcriptional-regulating factor 1 isoform X7

    15. XM_017345130.2 → XP_017200619.2  transcriptional-regulating factor 1 isoform X8

    16. XM_051855698.1 → XP_051711658.1  transcriptional-regulating factor 1 isoform X1

    17. XM_017345125.2 → XP_017200614.2  transcriptional-regulating factor 1 isoform X1

    18. XM_051855697.1 → XP_051711657.1  transcriptional-regulating factor 1 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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