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    elf1 E74-like ETS transcription factor 1 [ Gasterosteus aculeatus (three-spined stickleback) ]

    Gene ID: 120817283, updated on 21-Mar-2024

    Summary

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    Gene symbol
    elf1
    Gene description
    E74-like ETS transcription factor 1
    See related
    EnsemblRapid:ENSGACG00000017463
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gasterosteus aculeatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
    Orthologs
    zebrafish all
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current GAculeatus_UGA_version5 (GCF_016920845.1) 4 NC_053215.1 (6686443..6719495)

    Chromosome 4 - NC_053215.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene ubiquitin-conjugating enzyme E2A (RAD6 homolog) Neighboring gene tenomodulin Neighboring gene uncharacterized LOC120818496

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053215.1 Chromosome 4 Reference GAculeatus_UGA_version5 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ETS-related transcription factor Elf-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gasterosteus aculeatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GAculeatus_UGA_version5 Primary Assembly

    Genomic

    1. NC_053215.1 Reference GAculeatus_UGA_version5 Primary Assembly

      Range
      6686443..6719495
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040173320.1 → XP_040029254.1  ETS-related transcription factor Elf-1 isoform X1

      Conserved Domains (1) summary
      smart00413
      Location:221 → 303
      ETS; erythroblast transformation specific domain

    2. XM_040173321.1 → XP_040029255.1  ETS-related transcription factor Elf-1 isoform X1

      Related
      ENSGACP00000041315.1, ENSGACT00000040808.1
      Conserved Domains (1) summary
      smart00413
      Location:221 → 303
      ETS; erythroblast transformation specific domain

    3. XM_040173319.1 → XP_040029253.1  ETS-related transcription factor Elf-1 isoform X1

      Conserved Domains (1) summary
      smart00413
      Location:221 → 303
      ETS; erythroblast transformation specific domain

    4. XM_040173322.1 → XP_040029256.1  ETS-related transcription factor Elf-1 isoform X2

      UniProtKB/TrEMBL
      G3PZN4
      Related
      ENSGACP00000023074.2, ENSGACT00000023118.2
      Conserved Domains (1) summary
      smart00413
      Location:202 → 284
      ETS; erythroblast transformation specific domain
    Nucleotide Protein Strain
    Heading Accession and Version

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