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    arid1a AT-rich interaction domain 1A [ Anolis carolinensis (green anole) ]

    Gene ID: 100553272, updated on 8-Mar-2024

    Summary

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    Gene symbol
    arid1a
    Gene description
    AT-rich interaction domain 1A
    See related
    Ensembl:ENSACAG00000016601
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anolis carolinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) Unplaced Scaffold NW_026943821.1 (25498840..25556847, complement)
    102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003339035.1 (48290..104784)

    NW_026943821.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 18 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class V Neighboring gene uncharacterized LOC134293723 Neighboring gene uncharacterized LOC134293724 Neighboring gene ribosomal protein S6 kinase A1 Neighboring gene high mobility group nucleosomal binding domain 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SWI/SNF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of brahma complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nBAF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AT-rich interactive domain-containing protein 1A
    Names
    AT rich interactive domain 1A (SWI-like)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAnoCar3.1.pri

    Genomic

    1. NW_026943821.1 Reference rAnoCar3.1.pri

      Range
      25498840..25556847 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008120673.3 → XP_008118880.3  AT-rich interactive domain-containing protein 1A

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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