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insF5 IS3 element protein InsF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946629, updated on 4-Apr-2024

Summary

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Gene symbol
insF5
Gene description
IS3 element protein InsF
Primary source
ASAP:ABE-0006919
Locus tag
b2089
See related
ECOCYC:G7126
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0299; tra5-4
Summary
InsF is one of three proteins coded for by the IS3 insertion element. [More information is available at EcoCyc: G7126].
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Genomic context

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Sequence:
NC_000913.3 (2170532..2171398)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YegR Neighboring gene lipid kinase YegS Neighboring gene pseudo Neighboring gene IS3 element protein InsE Neighboring gene galactitol-1-phosphate 5-dehydrogenase Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  2. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  3. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in DNA integration IEA
Inferred from Electronic Annotation
more info
  
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
  
involved_in transposition IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
IS3 element protein InsF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2170532..2171398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416593.1 IS3 element protein InsF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416593.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0A8J8T4, A0A0E1SXV0, A0A0H3EU32, A0A2H4TZ32, A0A2Z2JDJ4, A0A376MA05, A0A376RET8, A0A377FEA8, A0A4U9UIJ7, A0A7G2KHL7, A0A7U9NXV6, A0A827BTF7, A0A8S7NX01, A0A8S7RNE7, A0AA89V3F9, E6BD46, F4VA79, W1EYU0
    Conserved Domains (1) summary
    NF033516
    Location:1 → 283
    transpos_IS3; IS3 family transposase
Nucleotide Protein
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