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cggR transcriptional regulator of gapA [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938570, updated on 6-Oct-2023

Summary

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Gene symbol
cggR
Gene description
transcriptional regulator of gapA
Locus tag
BSU_33950
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU33950
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Genomic context

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Sequence:
NC_000964.3 (3482752..3483774, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene phosphoglycerate kinase Neighboring gene glyceraldehyde-3-phosphate dehydrogenase (NAD-dependent, glycolytic) Neighboring gene arabinose-related compounds permease Neighboring gene transcriptional repressor of the ara regulon (LacI family)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Fructose-1,6-bisphosphate acts both as an inducer and as a structural cofactor of the central glycolytic genes repressor (CggR). Zorrilla S, et al. Biochemistry, 2007 Dec 25. PMID 18052209
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. FBP binding at this site reduces the size of the CggR oligomers and induces conformational changes that stabilize the dimer against denaturation
    Title: Fructose-1,6-bisphosphate acts both as an inducer and as a structural cofactor of the central glycolytic genes repressor (CggR).
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
transcriptional regulator of gapA
NP_391275.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 11489127, 12622823, 17142398, 17293407, 18052209, 18554327; Product type r : regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3482752..3483774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391275.1 transcriptional regulator of gapA [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391275.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KBJ2
    Conserved Domains (1) summary
    COG2390
    Location:9 → 340
    DeoR; DNA-binding transcriptional regulator LsrR, DeoR family [Transcription]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O32253.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials