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ldtB L,D-transpeptidase LdtB [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 888160, updated on 6-Oct-2023

Summary

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Gene symbol
ldtB
Gene description
L,D-transpeptidase LdtB
Locus tag
Rv2518c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (2834109..2835335, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tRNA-Lys Neighboring gene PE family protein PE26

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
L,D-transpeptidase LdtB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    2834109..2835335 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_217034.1 L,D-transpeptidase LdtB [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_217034.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0H3LG47
    Conserved Domains (2) summary
    cd16913
    Location:261 → 378
    YkuD_like; L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD
    pfam17964
    Location:70 → 250
    Big_10; Bacterial Ig domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
5K69_A.1
5K69_B.1
I6Y9J2.1

Gene LinkOut

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Molecular Biology Databases
Research Materials