U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

porA hypothetical protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8618176, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
porA
Gene description
hypothetical protein
Primary source
dictyBase:DDB_G0271848
Locus tag
DDB_G0271848
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0168533; DDBDRAFT_0185213; DDB_0168533; DDB_0185213
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_007088.5 (946406..947600)

Chromosome 2 - NC_007088.5Genomic Context describing neighboring genes Neighboring gene vacuolar H+ ATPase F subunit Neighboring gene eIF-2 alpha Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_007088.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Purification, functional characterization, and cDNA sequencing of mitochondrial porin from Dictyostelium discoideum. Troll H, et al. J Biol Chem, 1992 Oct 15. PMID 1328220
  2. Involvement of a triton-insoluble floating fraction in Dictyostelium cell-cell adhesion. Harris TJ, et al. J Biol Chem, 2001 May 25. PMID 11278598
  3. Proteome analysis of Legionella vacuoles purified by magnetic immunoseparation reveals secretory and endosomal GTPases. Urwyler S, et al. Traffic, 2009 Jan. PMID 18980612
  4. Proteomic profiling of the extracellular matrix (slime sheath) of Dictyostelium discoideum. Huber RJ, et al. Proteomics, 2015 Oct. PMID 26152465
  5. Proteomics fingerprinting of phagosome maturation and evidence for the role of a Galpha during uptake. Gotthardt D, et al. Mol Cell Proteomics, 2006 Dec. PMID 16926386

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables porin activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables porin activity IEA
Inferred from Electronic Annotation
more info
  
enables voltage-gated monoatomic anion channel activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables voltage-gated monoatomic anion channel activity IEA
Inferred from Electronic Annotation
more info
  
enables voltage-gated monoatomic ion channel activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic anion transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of monoatomic ion transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IDA
Inferred from Direct Assay
more info
 PubMed 
located_in extracellular matrix HDA PubMed 
is_active_in mitochondrial outer membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitochondrial outer membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
located_in pathogen-containing vacuole HDA PubMed 
located_in phagocytic vesicle HDA PubMed 
part_of pore complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007088.5 Reference assembly

    Range
    946406..947600
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_640344.1 → XP_645436.1  hypothetical protein DDB_G0271848 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_645436.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q01501, Q55AH3, Q8T810
    Conserved Domains (1) summary
    cl03224
    Location:3 → 265
    Porin3; Eukaryotic porin family that forms channels in the mitochondrial outer membrane
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q55AH3.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Miscellaneous