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PIPK10 phosphatidylinositol phosphate kinase 10 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828066, updated on 15-Oct-2023

Summary

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Gene symbol
PIPK10
Gene description
phosphatidylinositol phosphate kinase 10
Primary source
Araport:AT4G01190
Locus tag
AT4G01190
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATPIPK10; F2N1.9; F2N1_9; phosphatidylinositol phosphate kinase 10
Summary
Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A. Preferentially phosphorylates PtdIns4P. Expressed in flowers and inflorescence stems.
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Genomic context

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Location:
chromosome: 4
Exon count:
9
Sequence:
Chromosome: 4; NC_003075.7 (504135..506403, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene XH/XS domain-containing protein Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein Neighboring gene glycosyl transferase family 1 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization and comparative analysis of Arabidopsis phosphatidylinositol phosphate 5-kinase 10 reveals differences in Arabidopsis and human phosphatidylinositol phosphate kinases. Perera IY, et al. FEBS Lett, 2005 Jun 20. PMID 15949803
  2. The Arabidopsis Phosphatidylinositol Phosphate 5-Kinase PIP5K3 is a key regulator of root hair tip growth. Kusano H, et al. Plant Cell, 2008 Feb. PMID 18281506, Free PMC Article
  3. Arabidopsis phosphatidylinositol phosphate kinase 1 binds F-actin and recruits phosphatidylinositol 4-kinase beta1 to the actin cytoskeleton. Davis AJ, et al. J Biol Chem, 2007 May 11. PMID 17379598
  4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Arabidopsis phosphatidylinositol phosphate (PtdInsP) kinase 10 (AtPIPK10; At4g01190) was cloned and characterized. [Arabidopsis phosphatidylinositol phosphate kinase 10 ] [AtPIPK10]
    Title: Characterization and comparative analysis of Arabidopsis phosphatidylinositol phosphate 5-kinase 10 reveals differences in Arabidopsis and human phosphatidylinositol phosphate kinases.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phosphatidylinositol phosphate biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
phosphatidylinositol phosphate kinase 10
NP_192028.1
  • phosphatidylinositol phosphate kinase 10 (PIPK10); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase, core (TAIR:AT1G01460.1); Has 1758 Blast hits to 1594 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 277; Plants - 390; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    504135..506403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340304.1 → NP_001329151.1  phosphatidylinositol phosphate kinase 10 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B6V4, A0A5S9XQN5

  2. NM_001340305.1 → NP_001329152.1  phosphatidylinositol phosphate kinase 10 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B6V4, A0A5S9XQN5

  3. NM_116349.1 → NP_192028.1  phosphatidylinositol phosphate kinase 10 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192028.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04613, Q9M149
    UniProtKB/TrEMBL
    A0A178V467
    Conserved Domains (1) summary
    smart00330
    Location:17 → 390
    PIPKc; Phosphatidylinositol phosphate kinases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M149.1

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