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MPK5 MAP kinase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826735, updated on 15-Oct-2023

Summary

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Gene symbol
MPK5
Gene description
MAP kinase 5
Primary source
Araport:AT4G11330
Locus tag
AT4G11330
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATMPK5; F8L21.120; F8L21_120; MAP kinase 5
Summary
MAP kinase
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (6891926..6894283)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Papain family cysteine protease Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene transferring glycosyl group transferase (DUF604) Neighboring gene tRNA-Ala

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ATMPKs: a gene family of plant MAP kinases in Arabidopsis thaliana. Mizoguchi T, et al. FEBS Lett, 1993 Dec 28. PMID 8282107
  2. The MKK2 pathway mediates cold and salt stress signaling in Arabidopsis. Teige M, et al. Mol Cell, 2004 Jul 2. PMID 15225555
  3. Mitogen-activated protein kinase cascades in plants: a new nomenclature. MAPK Group. Trends Plant Sci, 2002 Jul. PMID 12119167
  4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_117204.7

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables MAP kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within MAPK cascade ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within signal transduction IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
MAP kinase 5
NP_567378.4
  • MAP kinase 5 (MPK5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: MAP kinase 4 (TAIR:AT4G01370.1); Has 126445 Blast hits to 124887 proteins in 4831 species: Archae - 118; Bacteria - 13666; Metazoa - 48018; Fungi - 12607; Plants - 30504; Viruses - 585; Other Eukaryotes - 20947 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    6891926..6894283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117204.7 → NP_567378.4  MAP kinase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567378.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q39025, Q67YV7, Q9SUS8
    UniProtKB/TrEMBL
    A0A178UYG8, A0A5S9XR91, K7DXB7
    Conserved Domains (2) summary
    smart00220
    Location:46 → 329
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:36 → 372
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q39025.2

Gene LinkOut

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