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si:dkey-28d5.14 si:dkey-28d5.14 [ Danio rerio (zebrafish) ]

Gene ID: 799569, updated on 27-Mar-2024

Summary

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Official Symbol
si:dkey-28d5.14provided by ZNC
Official Full Name
si:dkey-28d5.14provided by ZNC
Primary source
ZFIN:ZDB-GENE-060503-730
See related
Ensembl:ENSDARG00000077136 AllianceGenome:ZFIN:ZDB-GENE-060503-730
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (4938652..4941526)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (4800626..4802318)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene macrophage mannose receptor 1-like Neighboring gene si:dkey-28d5.13 Neighboring gene si:dkey-28d5.12 Neighboring gene si:dkey-81n2.2 Neighboring gene si:dkey-81n2.1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
C-type mannose receptor 2-like; si:dkey-28d5.14
Names
c-type mannose receptor 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    4938652..4941526
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021477667.1 → XP_021333342.1  C-type mannose receptor 2-like

    UniProtKB/TrEMBL
    A0A8M9PPA6, F1QC82
    Related
    ENSDARP00000120335.2, ENSDART00000143722.3
    Conserved Domains (2) summary
    cd00037
    Location:252 → 364
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cl02432
    Location:135 → 246
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein Strain
Heading Accession and Version

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