bricd5 BRICHOS domain containing 5 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: bricd5provided by ZNC
Official Full Name: BRICHOS domain containing 5provided by ZNC
Primary source: ZFIN:ZDB-GENE-050208-85
See related: Ensembl:ENSDARG00000056247 AllianceGenome:ZFIN:ZDB-GENE-050208-85
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: hg21b; im:7138263
Summary: Predicted to be involved in regulation of cell population proliferation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Is expressed in otic placode and otic vesicle. Orthologous to human BRICD5 (BRICHOS domain containing 5). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 12

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (18552570..18560501, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (18430696..18438627, complement)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in regulation of cell population proliferation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in extracellular space	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: BRICHOS domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001327891.1 → NP_001314820.1 BRICHOS domain-containing protein 5

Status: VALIDATED

Source sequence(s)

CT009714

UniProtKB/TrEMBL

A0A8M1P972, F1R3F8

Related

ENSDARP00000072634.2, ENSDART00000078172.4

Conserved Domains (1) summary

smart01039
Location:99 → 192

BRICHOS; The BRICHOS domain is found in a variety of proteins implicated in dementia, respiratory distress and cancer