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SNRPB2 small nuclear ribonucleoprotein polypeptide B2 [ Bos taurus (cattle) ]

Gene ID: 767873, updated on 5-Mar-2024

Summary

Official Symbol
SNRPB2provided by VGNC
Official Full Name
small nuclear ribonucleoprotein polypeptide B2provided by VGNC
Primary source
VGNC:VGNC:35077
See related
BGD:BT25617; Ensembl:ENSBTAG00000027506
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (10562627..10576213)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 16B Neighboring gene Krueppel-like factor 4 Neighboring gene phosphoribosylaminoimidazole carboxylase pseudogene Neighboring gene otoraplin Neighboring gene ninein-like protein Neighboring gene N-acetylneuraminic acid phosphatase

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U1 snRNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
U2 small nuclear ribonucleoprotein B''
Names
small nuclear ribonucleoprotein polypeptide B''

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192552.1NP_001179481.1  U2 small nuclear ribonucleoprotein B''

    See identical proteins and their annotated locations for NP_001179481.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000013
    UniProtKB/TrEMBL
    G5E5Y0
    Conserved Domains (3) summary
    COG0724
    Location:1179
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12478
    Location:696
    RRM1_U2B; RNA recognition motif 1 in U2 small nuclear ribonucleoprotein B" (U2B") and similar proteins
    cd12481
    Location:139218
    RRM2_U2B; RNA recognition motif 2 found in vertebrate U2 small nuclear ribonucleoprotein B" (U2B")

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    10562627..10576213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015473489.3XP_015328975.1  U2 small nuclear ribonucleoprotein B'' isoform X1

    Conserved Domains (2) summary
    cd12481
    Location:146225
    RRM2_U2B; RNA recognition motif 2 (RRM2) found in vertebrate U2 small nuclear ribonucleoprotein B" (U2B")
    cd12478
    Location:696
    RRM1_U2B; RNA recognition motif 1 in U2 small nuclear ribonucleoprotein B" (U2B") and similar proteins
  2. XM_005200943.5XP_005201000.1  U2 small nuclear ribonucleoprotein B'' isoform X1

    See identical proteins and their annotated locations for XP_005201000.1

    Related
    ENSBTAP00000039319.4, ENSBTAT00000039526.5
    Conserved Domains (2) summary
    cd12481
    Location:146225
    RRM2_U2B; RNA recognition motif 2 (RRM2) found in vertebrate U2 small nuclear ribonucleoprotein B" (U2B")
    cd12478
    Location:696
    RRM1_U2B; RNA recognition motif 1 in U2 small nuclear ribonucleoprotein B" (U2B") and similar proteins