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IKZF5 IKAROS family zinc finger 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716950, updated on 5-Mar-2024

Summary

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Official Symbol
IKZF5provided by VGNC
Official Full Name
IKAROS family zinc finger 5provided by VGNC
Primary source
VGNC:VGNC:73590
Locus tag
EGK_20145
See related
Ensembl:ENSMMUG00000023480
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (123433646..123452354, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (118968534..118987181, complement)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene chromosome 9 C10orf88 homolog Neighboring gene phosphoseryl-tRNA kinase Neighboring gene acyl-CoA dehydrogenase short/branched chain Neighboring gene H6 family homeobox 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein Pegasus
Names
IKAROS family zinc finger 5 (Pegasus)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001261672.1 → NP_001248601.1  zinc finger protein Pegasus

    See identical proteins and their annotated locations for NP_001248601.1

    Status: PROVISIONAL

    Source sequence(s)
    JV044623
    UniProtKB/TrEMBL
    A0A8J8XQK5, F7E7E6, F7EM83, G7N1B6
    Related
    ENSMMUP00000035561.3, ENSMMUT00000042553.3
    Conserved Domains (3) summary
    PHA03269
    Location:251 → 361
    PHA03269; envelope glycoprotein C; Provisional
    sd00017
    Location:84 → 104
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:124 → 148
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    123433646..123452354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015148316.2 → XP_015003802.1  zinc finger protein Pegasus isoform X1

    UniProtKB/TrEMBL
    A0A8J8XQK5, F7E7E6, F7EM83, G7N1B6
    Related
    ENSMMUP00000080940.1, ENSMMUT00000100654.1
    Conserved Domains (3) summary
    PHA03269
    Location:251 → 361
    PHA03269; envelope glycoprotein C; Provisional
    sd00017
    Location:84 → 104
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:124 → 148
    zf-H2C2_2; Zinc-finger double domain

  2. XM_015148315.2 → XP_015003801.1  zinc finger protein Pegasus isoform X1

    UniProtKB/TrEMBL
    A0A8J8XQK5, F7E7E6, F7EM83, G7N1B6
    Conserved Domains (3) summary
    PHA03269
    Location:251 → 361
    PHA03269; envelope glycoprotein C; Provisional
    sd00017
    Location:84 → 104
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:124 → 148
    zf-H2C2_2; Zinc-finger double domain

  3. XM_015148317.2 → XP_015003803.1  zinc finger protein Pegasus isoform X1

    UniProtKB/TrEMBL
    A0A8J8XQK5, F7E7E6, F7EM83, G7N1B6
    Conserved Domains (3) summary
    PHA03269
    Location:251 → 361
    PHA03269; envelope glycoprotein C; Provisional
    sd00017
    Location:84 → 104
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:124 → 148
    zf-H2C2_2; Zinc-finger double domain

  4. XM_015148318.2 → XP_015003804.1  zinc finger protein Pegasus isoform X2

    Conserved Domains (3) summary
    PHA03269
    Location:235 → 345
    PHA03269; envelope glycoprotein C; Provisional
    sd00017
    Location:68 → 88
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:108 → 132
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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