VPS18 VPS18 core subunit of CORVET and HOPS complexes [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: VPS18provided by VGNC
Official Full Name: VPS18 core subunit of CORVET and HOPS complexesprovided by VGNC
Primary source: VGNC:VGNC:78999
Locus tag: EGK_17377
See related: Ensembl:ENSMMUG00000014539
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	7	NC_041760.1 (17357141..17366768)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	7	NC_027899.1 (17276365..17285639)

Chromosome 7 - NC_041760.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein-macromolecule adaptor activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in endosome organization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in endosome to lysosome transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in intracellular protein transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in lysosome organization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in organelle fusion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in vesicle docking involved in exocytosis	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of HOPS complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in endosome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: vacuolar protein sorting-associated protein 18 homolog

Names: VPS18, CORVET/HOPS core subunit; Vacuolar protein sorting-associated protein 18-like protein; vacuolar protein sorting 18 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001257653.1 → NP_001244582.1 vacuolar protein sorting-associated protein 18 homolog

See identical proteins and their annotated locations for NP_001244582.1

Status: PROVISIONAL

Source sequence(s)

JU335656

UniProtKB/TrEMBL

A0A8J8YEV3, F7G761, G7MWP8

Related

ENSMMUP00000019091.2, ENSMMUT00000020396.4

Conserved Domains (3) summary

cd16689
Location:851 → 881

RING-H2_Vps18; RING finger, H2 subclass, found in vacuolar protein sorting-associated protein 18 (Vps18) and similar proteins

pfam05131
Location:291 → 434

Pep3_Vps18; Pep3/Vps18/deep orange family

cl26078
Location:615 → 768

Clathrin; Region in Clathrin and VPS