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SNRPA small nuclear ribonucleoprotein polypeptide A [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702730, updated on 5-Mar-2024

Summary

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Official Symbol
SNRPAprovided by VGNC
Official Full Name
small nuclear ribonucleoprotein polypeptide Aprovided by VGNC
Primary source
VGNC:VGNC:77674
Locus tag
EGK_10636
See related
Ensembl:ENSMMUG00000022024
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SNRPA in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (39971541..39986800)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (36515110..36530814)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene coenzyme Q8B Neighboring gene U6 spliceosomal RNA Neighboring gene inositol-trisphosphate 3-kinase C Neighboring gene actin maturation protease Neighboring gene MIA SH3 domain containing Neighboring gene RAB4B, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U1 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U1 small nuclear ribonucleoprotein A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257505.1 → NP_001244434.1  U1 small nuclear ribonucleoprotein A

    See identical proteins and their annotated locations for NP_001244434.1

    Status: PROVISIONAL

    Source sequence(s)
    JU320456
    UniProtKB/TrEMBL
    A0A1D5Q8H4, A0A8J8YH87, F7GVF3, G7NLI0
    Conserved Domains (2) summary
    cd12477
    Location:7 → 95
    RRM1_U1A; RNA recognition motif 1 (RRM1) found in vertebrate U1 small nuclear ribonucleoprotein A (U1A)
    cd12480
    Location:197 → 282
    RRM2_U1A; RNA recognition motif 2 (RRM2) found in vertebrate U1 small nuclear ribonucleoprotein A (U1 snRNP A or U1-A or U1A)

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    39971541..39986800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015123962.2 → XP_014979448.1  U1 small nuclear ribonucleoprotein A isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q8H4, A0A8J8YH87, F7GVF3, G7NLI0
    Conserved Domains (2) summary
    cd12477
    Location:7 → 95
    RRM1_U1A; RNA recognition motif 1 (RRM1) found in vertebrate U1 small nuclear ribonucleoprotein A (U1A)
    cd12480
    Location:197 → 282
    RRM2_U1A; RNA recognition motif 2 (RRM2) found in vertebrate U1 small nuclear ribonucleoprotein A (U1 snRNP A or U1-A or U1A)

  2. XM_015123965.2 → XP_014979451.1  U1 small nuclear ribonucleoprotein A isoform X2

    Conserved Domains (3) summary
    TIGR01628
    Location:2 → 177
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12480
    Location:147 → 232
    RRM2_U1A; RNA recognition motif 2 (RRM2) found in vertebrate U1 small nuclear ribonucleoprotein A (U1 snRNP A or U1-A or U1A)
    cl17169
    Location:1 → 49
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_015123963.2 → XP_014979449.1  U1 small nuclear ribonucleoprotein A isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q8H4, A0A8J8YH87, F7GVF3, G7NLI0
    Related
    ENSMMUP00000044342.2, ENSMMUT00000065479.2
    Conserved Domains (2) summary
    cd12477
    Location:7 → 95
    RRM1_U1A; RNA recognition motif 1 (RRM1) found in vertebrate U1 small nuclear ribonucleoprotein A (U1A)
    cd12480
    Location:197 → 282
    RRM2_U1A; RNA recognition motif 2 (RRM2) found in vertebrate U1 small nuclear ribonucleoprotein A (U1 snRNP A or U1-A or U1A)
Nucleotide Protein
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