PCDHB1 protocadherin beta 1 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Gene symbol: PCDHB1
Gene description: protocadherin beta 1
See related: Ensembl:ENSMMUG00000014574
Gene type: protein coding
RefSeq status: INFERRED
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	6	NC_041759.1 (138432361..138434946)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	6	NC_027898.1 (138817433..138820018)

Chromosome 6 - NC_041759.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

PCDHB1__1201 (e-PCR)
- UniSTS:277564

PCDHB1__v329 (e-PCR)
- UniSTS:277564

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables calcium ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: protocadherin beta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001193851.3 → NP_001180780.3 protocadherin beta-1

Status: INFERRED

Source sequence(s)

QNVO02000388

UniProtKB/TrEMBL

A0A5K1V029, F7GRQ5, G7MV01

Related

ENSMMUP00000019137.4, ENSMMUT00000020446.4

Conserved Domains (3) summary

cd11304
Location:246 → 343

Cadherin_repeat; Cadherin tandem repeat domain

pfam08266
Location:30 → 110

Cadherin_2; Cadherin-like

pfam16492
Location:688 → 772

Cadherin_C_2; Cadherin cytoplasmic C-terminal