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LARP1B La ribonucleoprotein 1B [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 693747, updated on 5-Mar-2024

Summary

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Official Symbol
LARP1Bprovided by VGNC
Official Full Name
La ribonucleoprotein 1Bprovided by VGNC
Primary source
VGNC:VGNC:74115
See related
Ensembl:ENSMMUG00000021347
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
LARP2
Orthologs
human mouse all
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Genomic context

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See LARP1B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
27
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (125841621..125996380)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (127390421..127545525)

Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene polo like kinase 4 Neighboring gene major facilitator superfamily domain containing 8 Neighboring gene abhydrolase domain containing 18 Neighboring gene 60S ribosomal protein L15-like Neighboring gene fos-related antigen 1 pseudogene Neighboring gene uncharacterized LOC114678394 Neighboring gene progesterone receptor membrane component 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA stabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
la-related protein 1B
Names
La ribonucleoprotein domain family member 1B
La ribonucleoprotein domain family, member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041758.1 Reference Mmul_10 Primary Assembly

    Range
    125841621..125996380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015139203.2 → XP_014994689.1  la-related protein 1B isoform X3

    UniProtKB/TrEMBL
    F7DKZ1, G7MRZ1
    Related
    ENSMMUP00000028120.2, ENSMMUT00000030048.4
    Conserved Domains (2) summary
    smart00684
    Location:744 → 782
    DM15; Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144.7. Unknown function
    cl02755
    Location:216 → 288
    LAM; LA motif RNA-binding domain

  2. XM_015139202.2 → XP_014994688.1  la-related protein 1B isoform X3

    UniProtKB/TrEMBL
    F7DKZ1, G7MRZ1
    Conserved Domains (2) summary
    smart00684
    Location:744 → 782
    DM15; Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144.7. Unknown function
    cl02755
    Location:216 → 288
    LAM; LA motif RNA-binding domain

  3. XM_015139200.2 → XP_014994686.1  la-related protein 1B isoform X3

    UniProtKB/TrEMBL
    F7DKZ1, G7MRZ1
    Conserved Domains (2) summary
    smart00684
    Location:744 → 782
    DM15; Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144.7. Unknown function
    cl02755
    Location:216 → 288
    LAM; LA motif RNA-binding domain

  4. XM_015139208.2 → XP_014994694.1  la-related protein 1B isoform X9

    UniProtKB/TrEMBL
    F7DGW7
    Conserved Domains (1) summary
    cl02755
    Location:216 → 288
    LAM; LA motif RNA-binding domain

  5. XM_015139209.2 → XP_014994695.1  la-related protein 1B isoform X10

    UniProtKB/TrEMBL
    A0A1D5QPS2
    Related
    ENSMMUP00000050049.2, ENSMMUT00000061453.2
    Conserved Domains (2) summary
    COG5193
    Location:110 → 280
    LHP1; La protein, small RNA-binding pol III transcript stabilizing protein and related La-motif-containing proteins involved in translation [Posttranslational modification, protein turnover, chaperones / Translation, ribosomal structure and biogenesis]
    cl02755
    Location:216 → 288
    LAM; LA motif RNA-binding domain

  6. XM_015139197.2 → XP_014994683.1  la-related protein 1B isoform X1

    UniProtKB/TrEMBL
    F7DKZ1, G7MRZ1
    Conserved Domains (2) summary
    smart00684
    Location:946 → 984
    DM15; Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144.7. Unknown function
    cd08038
    Location:418 → 490
    LARP_2; La RNA-binding domain of La-related protein 2

  7. XM_015139198.2 → XP_014994684.1  la-related protein 1B isoform X2

    UniProtKB/TrEMBL
    F7DKZ1, G7MRZ1
    Conserved Domains (2) summary
    smart00684
    Location:938 → 976
    DM15; Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144.7. Unknown function
    cd08038
    Location:418 → 490
    LARP_2; La RNA-binding domain of La-related protein 2

  8. XM_028848768.1 → XP_028704601.1  la-related protein 1B isoform X4

    Conserved Domains (2) summary
    cd08038
    Location:418 → 490
    LARP_2; La RNA-binding domain of La-related protein 2
    COG5193
    Location:312 → 482
    LHP1; La protein, small RNA-binding pol III transcript stabilizing protein and related La-motif-containing proteins involved in translation [Posttranslational modification, protein turnover, chaperones / Translation, ribosomal structure and biogenesis]

  9. XM_015139205.2 → XP_014994691.1  la-related protein 1B isoform X6

    Conserved Domains (1) summary
    cd08038
    Location:418 → 490
    LARP_2; La RNA-binding domain of La-related protein 2

  10. XM_015139204.2 → XP_014994690.1  la-related protein 1B isoform X5

    Conserved Domains (1) summary
    cd08038
    Location:418 → 490
    LARP_2; La RNA-binding domain of La-related protein 2

  11. XM_015139206.2 → XP_014994692.1  la-related protein 1B isoform X7

    Conserved Domains (1) summary
    cd08038
    Location:418 → 490
    LARP_2; La RNA-binding domain of La-related protein 2

  12. XM_015139207.2 → XP_014994693.1  la-related protein 1B isoform X8

    Conserved Domains (1) summary
    cd08038
    Location:418 → 490
    LARP_2; La RNA-binding domain of La-related protein 2

  13. XM_015139201.2 → XP_014994687.1  la-related protein 1B isoform X3

    UniProtKB/TrEMBL
    F7DKZ1, G7MRZ1
    Conserved Domains (2) summary
    smart00684
    Location:744 → 782
    DM15; Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144.7. Unknown function
    cl02755
    Location:216 → 288
    LAM; LA motif RNA-binding domain

RNA

  1. XR_003729779.1 RNA Sequence

  2. XR_001444971.2 RNA Sequence

  3. XR_001444972.2 RNA Sequence

Nucleotide Protein
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