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Gask1b golgi associated kinase 1B [ Mus musculus (house mouse) ]

Gene ID: 68659, updated on 5-Mar-2024

Summary

Official Symbol
Gask1bprovided by MGI
Official Full Name
golgi associated kinase 1Bprovided by MGI
Primary source
MGI:MGI:1915909
See related
Ensembl:ENSMUSG00000027955 AllianceGenome:MGI:1915909
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ened; GaskbB; Fam198b; 1110032E23Rik; 2210419I08Rik
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including alimentary system; axial skeleton; eye; heart; and nervous system. Orthologous to human GASK1B (golgi associated kinase 1B). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in lung adult (RPKM 6.8), subcutaneous fat pad adult (RPKM 5.7) and 26 other tissues See more
Orthologs
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Genomic context

See Gask1b in Genome Data Viewer
Location:
3 E3; 3 35.13 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (79791795..79853585)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (79884484..79946278)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_08007 Neighboring gene VISTA enhancer mm1650 Neighboring gene relaxin/insulin-like family peptide receptor 1 Neighboring gene STARR-seq mESC enhancer starr_08009 Neighboring gene STARR-positive B cell enhancer ABC_E3438 Neighboring gene transmembrane protein 144 Neighboring gene STARR-seq mESC enhancer starr_08010 Neighboring gene STARR-seq mESC enhancer starr_08011 Neighboring gene predicted gene, 26420 Neighboring gene STARR-seq mESC enhancer starr_08012 Neighboring gene STARR-seq mESC enhancer starr_08013 Neighboring gene VISTA enhancer mm1052 Neighboring gene STARR-seq mESC enhancer starr_08014 Neighboring gene STARR-seq mESC enhancer starr_08015 Neighboring gene RIKEN cDNA A330069K06 gene Neighboring gene STARR-seq mESC enhancer starr_08016 Neighboring gene STARR-seq mESC enhancer starr_08017 Neighboring gene eukaryotic translation initiation factor 3, subunit M pseudogene Neighboring gene STARR-seq mESC enhancer starr_08018 Neighboring gene predicted gene, 57716

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Golgi-associated kinase 1B
Names
expressed in nerve and epithelium during development
family with sequence similarity 198, member B
protein ENED
protein FAM198B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133187.3NP_573450.2  Golgi-associated kinase 1B

    See identical proteins and their annotated locations for NP_573450.2

    Status: VALIDATED

    Source sequence(s)
    AC119162, AK143522
    Consensus CDS
    CCDS17422.1
    UniProtKB/Swiss-Prot
    B3VSA6, Q3UPI1, Q6PGJ9, Q8C781, Q9ET25
    Related
    ENSMUSP00000029567.9, ENSMUST00000029567.9
    Conserved Domains (1) summary
    pfam15051
    Location:202516
    FAM198; FAM198 protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    79791795..79853585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006501984.5XP_006502047.1  Golgi-associated kinase 1B isoform X1

    See identical proteins and their annotated locations for XP_006502047.1

    UniProtKB/Swiss-Prot
    B3VSA6, Q3UPI1, Q6PGJ9, Q8C781, Q9ET25
    Related
    ENSMUSP00000114093.2, ENSMUST00000118853.8
    Conserved Domains (1) summary
    pfam15051
    Location:202516
    FAM198; FAM198 protein
  2. XM_006501985.2XP_006502048.1  Golgi-associated kinase 1B isoform X1

    See identical proteins and their annotated locations for XP_006502048.1

    UniProtKB/Swiss-Prot
    B3VSA6, Q3UPI1, Q6PGJ9, Q8C781, Q9ET25
    Conserved Domains (1) summary
    pfam15051
    Location:202516
    FAM198; FAM198 protein