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CPuORF6 uncharacterized upstream conserved protein CPuORF6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 6240304, discontinued on 14-Sep-2016
  • This record was discontinued.

Summary

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Gene symbol
CPuORF6
Gene description
uncharacterized upstream conserved protein CPuORF6
Primary source
TAIR:AT2G27228
Locus tag
AT2G27228
Gene type
protein coding
RNA name
uncharacterized upstream conserved protein CPuORF6
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
conserved peptide upstream open reading frame 6; CPuORF6
Summary
Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF6 represents a conserved upstream opening reading frame relative to major ORF AT2G27230.1
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Sequence:
Chromosome: 2; NC_003071.7 (11650592..11650696)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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NM_001124925.1

General protein information

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Names
uncharacterized upstream conserved protein CPuORF6
NP_001118397.1
  • conserved peptide upstream open reading frame 6 (CPuORF6); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11650592..11650696
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001124925.1 → NP_001118397.1  uncharacterized upstream conserved protein CPuORF6 [Arabidopsis thaliana]

    Status: REVIEWED

Protein Accession Links
GenPept Link UniProtKB Link
AEC07958.1

Gene LinkOut

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