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ZBTB4 zinc finger and BTB domain containing 4 [ Bos taurus (cattle) ]

Gene ID: 613607, updated on 5-Mar-2024

Summary

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Official Symbol
ZBTB4provided by VGNC
Official Full Name
zinc finger and BTB domain containing 4provided by VGNC
Primary source
VGNC:VGNC:37078
See related
Ensembl:ENSBTAG00000008289
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (27131781..27149094, complement)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 102 Neighboring gene fibroblast growth factor 11 Neighboring gene cholinergic receptor nicotinic beta 1 subunit Neighboring gene solute carrier family 35 member G6 Neighboring gene RNA polymerase II subunit A Neighboring gene tumor necrosis factor (ligand) superfamily, member 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A second generation radiation hybrid map to aid the assembly of the bovine genome sequence. Jann OC, et al. BMC Genomics, 2006 Nov 6. PMID 17087818, Free PMC Article
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001206898.2 → NP_001193827.2  zinc finger and BTB domain-containing protein 4

    Status: VALIDATED

    Source sequence(s)
    NKLS02000019
    UniProtKB/TrEMBL
    F1MFQ4

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    27131781..27149094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059878216.1 → XP_059734199.1  zinc finger and BTB domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    F1MFQ4
    Related
    ENSBTAP00000010907.6, ENSBTAT00000010907.7

  2. XM_005220241.5 → XP_005220298.2  zinc finger and BTB domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    F1MFQ4
    Conserved Domains (4) summary
    sd00017
    Location:305 → 325
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:20 → 142
    BTB; BTB/POZ domain
    pfam13894
    Location:720 → 742
    zf-C2H2_4; C2H2-type zinc finger
    pfam13913
    Location:229 → 251
    zf-C2HC_2; zinc-finger of a C2HC-type

  3. XM_005220243.5 → XP_005220300.2  zinc finger and BTB domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    F1MFQ4
    Conserved Domains (4) summary
    sd00017
    Location:305 → 325
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:20 → 142
    BTB; BTB/POZ domain
    pfam13894
    Location:720 → 742
    zf-C2H2_4; C2H2-type zinc finger
    pfam13913
    Location:229 → 251
    zf-C2HC_2; zinc-finger of a C2HC-type
Nucleotide Protein Strain
Heading Accession and Version

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