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R3HDM2 R3H domain containing 2 [ Bos taurus (cattle) ]

Gene ID: 613499, updated on 5-Mar-2024

Summary

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Official Symbol
R3HDM2provided by VGNC
Official Full Name
R3H domain containing 2provided by VGNC
Primary source
VGNC:VGNC:106430
See related
Ensembl:ENSBTAG00000018361
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (56031460..56191525)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene inhibin subunit beta E Neighboring gene inhibin subunit beta C Neighboring gene SH3 and cysteine rich domain 3 Neighboring gene NDUFA4 mitochondrial complex associated like 2 Neighboring gene serine hydroxymethyltransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC142849

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
R3H domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001078034.1 → NP_001071502.1  R3H domain-containing protein 2

    See identical proteins and their annotated locations for NP_001071502.1

    Status: PROVISIONAL

    Source sequence(s)
    BC126608
    UniProtKB/Swiss-Prot
    A0JNC2
    Related
    ENSBTAP00000076816.1, ENSBTAT00000126663.1
    Conserved Domains (3) summary
    cd02642
    Location:168 → 229
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:463 → 721
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam12752
    Location:250 → 303
    SUZ; SUZ domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    56031460..56191525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059886670.1 → XP_059742653.1  R3H domain-containing protein 2 isoform X1

  2. XM_059886677.1 → XP_059742660.1  R3H domain-containing protein 2 isoform X1

  3. XM_059886678.1 → XP_059742661.1  R3H domain-containing protein 2 isoform X1

  4. XM_059886672.1 → XP_059742655.1  R3H domain-containing protein 2 isoform X1

  5. XM_059886674.1 → XP_059742657.1  R3H domain-containing protein 2 isoform X1

  6. XM_059886676.1 → XP_059742659.1  R3H domain-containing protein 2 isoform X1

  7. XM_059886675.1 → XP_059742658.1  R3H domain-containing protein 2 isoform X1

  8. XM_024992122.2 → XP_024847890.1  R3H domain-containing protein 2 isoform X1

    Conserved Domains (3) summary
    cd02642
    Location:168 → 229
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:486 → 784
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam12752
    Location:250 → 303
    SUZ; SUZ domain

  9. XM_059886687.1 → XP_059742670.1  R3H domain-containing protein 2 isoform X7

  10. XM_024992126.2 → XP_024847894.1  R3H domain-containing protein 2 isoform X2

    Conserved Domains (3) summary
    cd02642
    Location:168 → 229
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:465 → 773
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam12752
    Location:250 → 303
    SUZ; SUZ domain

  11. XM_024992134.2 → XP_024847902.1  R3H domain-containing protein 2 isoform X9

    Conserved Domains (3) summary
    cd02642
    Location:168 → 229
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:481 → 739
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam12752
    Location:250 → 303
    SUZ; SUZ domain

  12. XM_059886684.1 → XP_059742667.1  R3H domain-containing protein 2 isoform X3

  13. XM_024992130.2 → XP_024847898.1  R3H domain-containing protein 2 isoform X5

    Related
    ENSBTAP00000096501.1, ENSBTAT00000103173.1
    Conserved Domains (3) summary
    cd02642
    Location:168 → 229
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:447 → 755
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam12752
    Location:250 → 303
    SUZ; SUZ domain

  14. XM_059886686.1 → XP_059742669.1  R3H domain-containing protein 2 isoform X6

  15. XM_024992132.2 → XP_024847900.1  R3H domain-containing protein 2 isoform X8

    Conserved Domains (2) summary
    cd02642
    Location:168 → 229
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:433 → 741
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  16. XM_024992139.2 → XP_024847907.1  R3H domain-containing protein 2 isoform X14

    Conserved Domains (2) summary
    cd02642
    Location:168 → 229
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:449 → 707
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  17. XM_059886688.1 → XP_059742671.1  R3H domain-containing protein 2 isoform X10

  18. XM_024992135.2 → XP_024847903.1  R3H domain-containing protein 2 isoform X11

    Conserved Domains (2) summary
    cd02642
    Location:168 → 229
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:415 → 723
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  19. XM_024992140.2 → XP_024847908.1  R3H domain-containing protein 2 isoform X15

    Conserved Domains (2) summary
    cd02642
    Location:168 → 229
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:431 → 689
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  20. XM_059886685.1 → XP_059742668.1  R3H domain-containing protein 2 isoform X4

  21. XM_024992137.2 → XP_024847905.1  R3H domain-containing protein 2 isoform X13

    Conserved Domains (3) summary
    cd02642
    Location:164 → 209
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:461 → 719
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam12752
    Location:230 → 283
    SUZ; SUZ domain

  22. XM_059886681.1 → XP_059742664.1  R3H domain-containing protein 2 isoform X1

  23. XM_059886682.1 → XP_059742665.1  R3H domain-containing protein 2 isoform X1

  24. XM_059886673.1 → XP_059742656.1  R3H domain-containing protein 2 isoform X1

  25. XM_059886679.1 → XP_059742662.1  R3H domain-containing protein 2 isoform X1

  26. XM_059886680.1 → XP_059742663.1  R3H domain-containing protein 2 isoform X1

  27. XM_059886671.1 → XP_059742654.1  R3H domain-containing protein 2 isoform X1

  28. XM_059886689.1 → XP_059742672.1  R3H domain-containing protein 2 isoform X12

    UniProtKB/Swiss-Prot
    A0JNC2

  29. XM_024992133.2 → XP_024847901.1  R3H domain-containing protein 2 isoform X8

    Related
    ENSBTAP00000093594.1, ENSBTAT00000132037.1
    Conserved Domains (2) summary
    cd02642
    Location:168 → 229
    R3H_encore_like; R3H domain of encore-like and DIP1-like proteins. Drosophila encore is involved in the germline exit after four mitotic divisions, by facilitating SCF-ubiquitin-proteasome-dependent proteolysis. Maize DBF1-interactor protein 1 (DIP1) containing an R3H ...
    pfam09606
    Location:433 → 741
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  30. XM_059886683.1 → XP_059742666.1  R3H domain-containing protein 2 isoform X1

  31. XM_059886690.1 → XP_059742673.1  R3H domain-containing protein 2 isoform X16

  32. XM_059886691.1 → XP_059742674.1  R3H domain-containing protein 2 isoform X17

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0JNC2.1 GenPept UniProtKB/Swiss-Prot:A0JNC2

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