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CRACR2B calcium release activated channel regulator 2B [ Canis lupus familiaris (dog) ]

Gene ID: 611409, updated on 5-Mar-2024

Summary

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Official Symbol
CRACR2Bprovided by VGNC
Official Full Name
calcium release activated channel regulator 2Bprovided by VGNC
Primary source
VGNC:VGNC:39590
See related
Ensembl:ENSCAFG00845006671
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
EFCAB4A
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 18 NC_051822.1 (45853437..45859041)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 18 NC_006600.4 (43855476..43861081)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 18 NC_049239.1 (45621151..45626754)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 18 NC_049278.1 (45319036..45323792)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 18 NC_049759.1 (44883025..44888623)

Chromosome 18 - NC_051822.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA52 Neighboring gene ribosomal protein lateral stalk subunit P2 Neighboring gene patatin like phospholipase domain containing 2 Neighboring gene CD151 molecule Neighboring gene RNA polymerase II, I and III subunit L

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EF-hand calcium-binding domain-containing protein 4A; LOW QUALITY PROTEIN: EF-hand calcium-binding domain-containing protein 4A
Names
EF-hand calcium binding domain 4A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051822.1 Reference ROS_Cfam_1.0

    Range
    45853437..45859041
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038424593.1 → XP_038280521.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    A0A8I3N3P4
    Conserved Domains (2) summary
    TIGR02168
    Location:192 → 370
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13499
    Location:41 → 98
    EF-hand_7; EF-hand domain pair

  2. XM_038424596.1 → XP_038280524.1  EF-hand calcium-binding domain-containing protein 4A isoform X2

    UniProtKB/TrEMBL
    A0A8I3N3P4
    Conserved Domains (2) summary
    PRK12309
    Location:43 → 99
    PRK12309; transaldolase
    TIGR02168
    Location:189 → 367
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. XM_038424594.1 → XP_038280522.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    A0A8I3N3P4
    Related
    ENSCAFP00845009239.1, ENSCAFT00845011842.1
    Conserved Domains (2) summary
    TIGR02168
    Location:192 → 370
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13499
    Location:41 → 98
    EF-hand_7; EF-hand domain pair

  4. XM_038424595.1 → XP_038280523.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    A0A8I3N3P4
    Conserved Domains (2) summary
    TIGR02168
    Location:192 → 370
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13499
    Location:41 → 98
    EF-hand_7; EF-hand domain pair

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049278.1 Alternate UMICH_Zoey_3.1

    Range
    45319036..45323792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038500864.1 → XP_038356792.1  LOW QUALITY PROTEIN: EF-hand calcium-binding domain-containing protein 4A isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049759.1 Alternate UNSW_CanFamBas_1.0

    Range
    44883025..44888623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038627642.1 → XP_038483570.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    Conserved Domains (2) summary
    TIGR02168
    Location:192 → 370
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13499
    Location:41 → 98
    EF-hand_7; EF-hand domain pair

  2. XM_038627645.1 → XP_038483573.1  EF-hand calcium-binding domain-containing protein 4A isoform X2

    Conserved Domains (2) summary
    PRK12309
    Location:43 → 99
    PRK12309; transaldolase
    TIGR02168
    Location:189 → 367
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. XM_038627643.1 → XP_038483571.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    Conserved Domains (2) summary
    TIGR02168
    Location:192 → 370
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13499
    Location:41 → 98
    EF-hand_7; EF-hand domain pair

  4. XM_038627644.1 → XP_038483572.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    Conserved Domains (2) summary
    TIGR02168
    Location:192 → 370
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13499
    Location:41 → 98
    EF-hand_7; EF-hand domain pair

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049239.1 Alternate UU_Cfam_GSD_1.0

    Range
    45621151..45626754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038563521.1 → XP_038419449.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    A0A8P0NBV0

  2. XM_038563524.1 → XP_038419452.1  EF-hand calcium-binding domain-containing protein 4A isoform X2

    UniProtKB/TrEMBL
    A0A8P0NBV0

  3. XM_038563522.1 → XP_038419450.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    A0A8P0NBV0

  4. XM_038563523.1 → XP_038419451.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    A0A8P0NBV0

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    43855476..43861081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_849078.5 → XP_854171.3  EF-hand calcium-binding domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    A0A8P0NBV0
    Conserved Domains (2) summary
    TIGR02168
    Location:193 → 371
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13499
    Location:41 → 98
    EF-hand_7; EF-hand domain pair

  2. XM_014121114.3 → XP_013976589.2  EF-hand calcium-binding domain-containing protein 4A isoform X2

    UniProtKB/TrEMBL
    A0A8P0NBV0
    Conserved Domains (2) summary
    PRK12309
    Location:43 → 99
    PRK12309; transaldolase
    TIGR02168
    Location:190 → 368
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. XM_038454114.1 → XP_038310042.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    A0A8P0NBV0
    Conserved Domains (2) summary
    TIGR02168
    Location:193 → 371
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13499
    Location:41 → 98
    EF-hand_7; EF-hand domain pair

  4. XM_038454115.1 → XP_038310043.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    UniProtKB/TrEMBL
    A0A8P0NBV0
    Conserved Domains (2) summary
    TIGR02168
    Location:193 → 371
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam13499
    Location:41 → 98
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
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