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HMX3 H6 family homeobox 3 [ Canis lupus familiaris (dog) ]

Gene ID: 611245, updated on 5-Mar-2024

Summary

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Official Symbol
HMX3provided by VGNC
Official Full Name
H6 family homeobox 3provided by VGNC
Primary source
VGNC:VGNC:49908
See related
Ensembl:ENSCAFG00845024473
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See HMX3 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (33230145..33231847)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (32738924..32740626)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (33029307..33031009)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (32787275..32788976)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (32779432..32781134)

Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene IKAROS family zinc finger 5 Neighboring gene acyl-CoA dehydrogenase short/branched chain Neighboring gene uncharacterized LOC111093056 Neighboring gene H6 family homeobox 2 Neighboring gene BUB3 mitotic checkpoint protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein HMX3
Names
homeobox (H6 family) 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051832.1 Reference ROS_Cfam_1.0

    Range
    33230145..33231847
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038439691.1 → XP_038295619.1  homeobox protein HMX3

    UniProtKB/TrEMBL
    A0A8C0KS87, A0A8C0NYY0, A0A8I3PLU9
    Related
    ENSCAFP00845033881.1, ENSCAFT00845043217.1
    Conserved Domains (1) summary
    pfam00046
    Location:231 → 285
    Homeobox; Homeobox domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049288.1 Alternate UMICH_Zoey_3.1

    Range
    32787275..32788976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038515672.1 → XP_038371600.1  homeobox protein HMX3

    Conserved Domains (1) summary
    pfam00046
    Location:231 → 285
    Homeobox; Homeobox domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

    Range
    32779432..32781134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038642148.1 → XP_038498076.1  homeobox protein HMX3

    Conserved Domains (1) summary
    pfam00046
    Location:231 → 285
    Homeobox; Homeobox domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

    Range
    33029307..33031009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038577968.1 → XP_038433896.1  homeobox protein HMX3

    UniProtKB/TrEMBL
    A0A8C0KS87, A0A8C0NYY0, A0A8I3PLU9
    Conserved Domains (1) summary
    pfam00046
    Location:231 → 285
    Homeobox; Homeobox domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32738924..32740626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022411819.2 → XP_022267527.2  homeobox protein HMX3

    UniProtKB/TrEMBL
    A0A8C0KS87, A0A8C0NYY0, A0A8I3PLU9
    Conserved Domains (1) summary
    pfam00046
    Location:231 → 285
    Homeobox; Homeobox domain
Nucleotide Protein
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