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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051814.1 Reference ROS_Cfam_1.0
- Range
-
28190798..28228167
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038679956.1 → XP_038535884.1 transmembrane protease serine 6
- UniProtKB/TrEMBL
- A0A8C0JUF4, A0A8C0MPB1, A0A8I3RU13
- Related
- ENSCAFP00845010413.1, ENSCAFT00845013420.1
- Conserved Domains (5) summary
-
- cd00112
Location:484 → 514
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:566 → 798
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:518 → 555
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam01390
Location:75 → 175
- SEA; SEA domain
- cl00049
Location:324 → 438
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049270.1 Alternate UMICH_Zoey_3.1
- Range
-
27912441..27949753
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038488701.1 → XP_038344629.1 transmembrane protease serine 6
- Conserved Domains (5) summary
-
- cd00112
Location:484 → 514
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:566 → 798
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:518 → 555
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam01390
Location:75 → 175
- SEA; SEA domain
- cl00049
Location:324 → 438
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049751.1 Alternate UNSW_CanFamBas_1.0
- Range
-
28221179..28258351
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038614596.1 → XP_038470524.1 transmembrane protease serine 6
- Conserved Domains (5) summary
-
- cd00112
Location:484 → 514
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:566 → 798
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:518 → 555
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam01390
Location:75 → 175
- SEA; SEA domain
- cl00049
Location:324 → 438
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049231.1 Alternate UU_Cfam_GSD_1.0
- Range
-
28399083..28436250
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038550664.1 → XP_038406592.1 transmembrane protease serine 6
- UniProtKB/TrEMBL
- A0A8C0JUF4, A0A8C0MPB1, A0A8I3RU13
- Conserved Domains (5) summary
-
- cd00112
Location:484 → 514
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:566 → 798
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:518 → 555
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam01390
Location:75 → 175
- SEA; SEA domain
- cl00049
Location:324 → 438
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
27353491..27390639
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_845457.5 → XP_850550.2 transmembrane protease serine 6
- UniProtKB/TrEMBL
- A0A8C0JUF4, A0A8C0MPB1, A0A8I3RU13
- Conserved Domains (5) summary
-
- cd00112
Location:484 → 514
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd00190
Location:566 → 798
- Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
- pfam00057
Location:518 → 555
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam01390
Location:75 → 175
- SEA; SEA domain
- cl00049
Location:324 → 438
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.