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CSTL1 cystatin like 1 [ Canis lupus familiaris (dog) ]

Gene ID: 606837, updated on 5-Mar-2024

Summary

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Official Symbol
CSTL1provided by VGNC
Official Full Name
cystatin like 1provided by VGNC
Primary source
VGNC:VGNC:39685
See related
Ensembl:ENSCAFG00845026794
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See CSTL1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 24 NC_051828.1 (589819..594687, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 24 NC_006606.4 (219215..224082, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 24 NC_049245.1 (575363..580231, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 24 NC_049284.1 (192125..196992, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 24 NC_049765.1 (291488..296354, complement)

Chromosome 24 - NC_051828.1Genomic Context describing neighboring genes Neighboring gene nuclear transport factor 2-like Neighboring gene cystatin 11 Neighboring gene NSF attachment protein beta Neighboring gene GDNF inducible zinc finger protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cystatin-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051828.1 Reference ROS_Cfam_1.0

    Range
    589819..594687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038432846.1 → XP_038288774.1  cystatin-like 1

    UniProtKB/TrEMBL
    A0A8C0P6V0, A0A8C0R936, A0A8I3PQN0
    Related
    ENSCAFP00845037056.1, ENSCAFT00845047216.1
    Conserved Domains (1) summary
    smart00043
    Location:29 → 136
    CY; Cystatin-like domain

  2. XM_038432847.1 → XP_038288775.1  cystatin-like 1

    UniProtKB/TrEMBL
    A0A8C0P6V0, A0A8C0R936, A0A8I3PQN0
    Conserved Domains (1) summary
    smart00043
    Location:29 → 136
    CY; Cystatin-like domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049284.1 Alternate UMICH_Zoey_3.1

    Range
    192125..196992 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038509612.1 → XP_038365540.1  cystatin-like 1

    Conserved Domains (1) summary
    smart00043
    Location:29 → 136
    CY; Cystatin-like domain

  2. XM_038509613.1 → XP_038365541.1  cystatin-like 1

    Conserved Domains (1) summary
    smart00043
    Location:29 → 136
    CY; Cystatin-like domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049765.1 Alternate UNSW_CanFamBas_1.0

    Range
    291488..296354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038635547.1 → XP_038491475.1  cystatin-like 1

    Conserved Domains (1) summary
    smart00043
    Location:29 → 136
    CY; Cystatin-like domain

  2. XM_038635548.1 → XP_038491476.1  cystatin-like 1

    Conserved Domains (1) summary
    smart00043
    Location:29 → 136
    CY; Cystatin-like domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049245.1 Alternate UU_Cfam_GSD_1.0

    Range
    575363..580231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038571353.1 → XP_038427281.1  cystatin-like 1

    UniProtKB/TrEMBL
    A0A8C0P6V0, A0A8C0R936, A0A8I3PQN0
    Conserved Domains (1) summary
    smart00043
    Location:29 → 136
    CY; Cystatin-like domain

  2. XM_038571354.1 → XP_038427282.1  cystatin-like 1

    UniProtKB/TrEMBL
    A0A8C0P6V0, A0A8C0R936, A0A8I3PQN0
    Conserved Domains (1) summary
    smart00043
    Location:29 → 136
    CY; Cystatin-like domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006606.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    219215..224082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_843289.5 → XP_848382.2  cystatin-like 1

    See identical proteins and their annotated locations for XP_848382.2

    UniProtKB/TrEMBL
    A0A8C0P6V0, A0A8C0R936, A0A8I3PQN0
    Conserved Domains (1) summary
    smart00043
    Location:29 → 136
    CY; Cystatin-like domain

  2. XM_022409176.1 → XP_022264884.1  cystatin-like 1

    UniProtKB/TrEMBL
    A0A8C0P6V0, A0A8C0R936, A0A8I3PQN0
    Conserved Domains (1) summary
    smart00043
    Location:29 → 136
    CY; Cystatin-like domain
Nucleotide Protein
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