nemp1 nuclear envelope integral membrane protein 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: nemp1provided by ZNC
Official Full Name: nuclear envelope integral membrane protein 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-090313-182
See related: Ensembl:ENSDARG00000073899 AllianceGenome:ZFIN:ZDB-GENE-090313-182
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: tmem194a; si:dkey-126g1.8
Summary: Predicted to be located in nuclear inner membrane. Predicted to be integral component of membrane. Predicted to be active in nuclear envelope. Orthologous to human NEMP1 (nuclear envelope integral membrane protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 23

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	23	NC_007134.7 (31942044..31953901)
105	previous assembly	GRCz10 (GCF_000002035.5)	23	NC_007134.6 (32015513..32027370)

Chromosome 23 - NC_007134.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fe12h12.y1 (e-PCR)
- UniSTS:196128

fb74d04.x1 (e-PCR)
- UniSTS:191199

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in erythrocyte enucleation	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within oocyte maturation	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in nuclear envelope	IBA Inferred from Biological aspect of Ancestor more info
located_in nuclear envelope	ISS Inferred from Sequence or Structural Similarity more info
located_in nuclear inner membrane	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: nuclear envelope integral membrane protein 1

Names: transmembrane protein 194A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001316731.1 → NP_001303660.1 nuclear envelope integral membrane protein 1 precursor

Status: VALIDATED

Source sequence(s)

BX927210, CT675406, CT705329

UniProtKB/Swiss-Prot

E7FE40

UniProtKB/TrEMBL

A0A8M1P7T3

Related

ENSDARP00000083040.4, ENSDART00000088607.6

Conserved Domains (1) summary

pfam10225
Location:150 → 387

DUF2215; Uncharacterized conserved protein (DUF2215)