U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC8A3 solute carrier family 8 member A3 [ Bos taurus (cattle) ]

Gene ID: 540307, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
SLC8A3provided by VGNC
Official Full Name
solute carrier family 8 member A3provided by VGNC
Primary source
VGNC:VGNC:34937
See related
BGD:BT29059; Ensembl:ENSBTAG00000027080
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (81762305..81931753, complement)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104973229 Neighboring gene solute carrier family 10 member 1 Neighboring gene SPARC related modular calcium binding 1 Neighboring gene uncharacterized LOC112448519 Neighboring gene uncharacterized LOC132346410 Neighboring gene synaptojanin 2 binding protein Neighboring gene large ribosomal subunit protein eL43-like Neighboring gene cytochrome c oxidase assembly factor COX16

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium:sodium antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sodium/calcium exchanger 3
Names
solute carrier family 8 (sodium-calcium exchanger), member 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001191199.3 → NP_001178128.1  sodium/calcium exchanger 3 precursor

    See identical proteins and their annotated locations for NP_001178128.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000010
    UniProtKB/TrEMBL
    A0A3Q1LST7
    Related
    ENSBTAP00000040809.4, ENSBTAT00000022798.6
    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 927
    caca; sodium/calcium exchanger 1

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    81762305..81931753 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059890582.1 → XP_059746565.1  sodium/calcium exchanger 3 isoform X1

    Related
    ENSBTAP00000059584.2, ENSBTAT00000077819.2

  2. XM_010809505.4 → XP_010807807.1  sodium/calcium exchanger 3 isoform X4

    See identical proteins and their annotated locations for XP_010807807.1

    UniProtKB/TrEMBL
    E1BM32
    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 921
    caca; sodium/calcium exchanger 1

  3. XM_015473255.3 → XP_015328741.1  sodium/calcium exchanger 3 isoform X6

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 926
    caca; sodium/calcium exchanger 1

  4. XM_010809503.4 → XP_010807805.1  sodium/calcium exchanger 3 isoform X2

    See identical proteins and their annotated locations for XP_010807805.1

    UniProtKB/TrEMBL
    A0A3Q1LST7
    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 927
    caca; sodium/calcium exchanger 1

  5. XM_015473254.3 → XP_015328740.1  sodium/calcium exchanger 3 isoform X3

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 927
    caca; sodium/calcium exchanger 1

  6. XM_005212028.5 → XP_005212085.1  sodium/calcium exchanger 3 isoform X1

    See identical proteins and their annotated locations for XP_005212085.1

    Conserved Domains (1) summary
    TIGR00845
    Location:1 → 928
    caca; sodium/calcium exchanger 1

  7. XM_024997760.2 → XP_024853528.1  sodium/calcium exchanger 3 isoform X5

    Conserved Domains (1) summary
    cl02522
    Location:4 → 311
    Calx-beta; Calx-beta domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.