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TUB TUB bipartite transcription factor [ Bos taurus (cattle) ]

Gene ID: 539051, updated on 5-Mar-2024

Summary

Official Symbol
TUBprovided by VGNC
Official Full Name
TUB bipartite transcription factorprovided by VGNC
Primary source
VGNC:VGNC:36503
See related
BGD:BT23036; Ensembl:ENSBTAG00000004862
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (44437018..44457846, complement)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene LIM domain only 1 Neighboring gene microRNA mir-2285bx Neighboring gene RIC3 acetylcholine receptor chaperone Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene eukaryotic translation initiation factor 3 subunit F

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

General protein information

Preferred Names
tubby protein homolog
Names
tubby bipartite transcription factor
tubby homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192160.2NP_001179089.1  tubby protein homolog

    See identical proteins and their annotated locations for NP_001179089.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000015
    UniProtKB/TrEMBL
    A0A3Q1MQM7, E1B8A6
    Related
    ENSBTAP00000072075.1, ENSBTAT00000083367.2
    Conserved Domains (2) summary
    pfam01167
    Location:260501
    Tub; Tub family
    pfam16322
    Location:29239
    Tub_N; Tubby N-terminal

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    44437018..44457846 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)