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CALN1 calneuron 1 [ Bos taurus (cattle) ]

Gene ID: 538163, updated on 5-Mar-2024

Summary

Official Symbol
CALN1provided by VGNC
Official Full Name
calneuron 1provided by VGNC
Primary source
VGNC:VGNC:26714
See related
BGD:BT20256; Ensembl:ENSBTAG00000043969
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See CALN1 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (28636197..29098356)

Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene transfer RNA histidin (anticodon GUG) Neighboring gene SBDS ribosome maturation factor Neighboring gene tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) Neighboring gene polypeptide N-acetylgalactosaminyltransferase 17 Neighboring gene microRNA mir-2386 Neighboring gene uncharacterized LOC112444308 Neighboring gene activator of transcription and developmental regulator AUTS2

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001206115.1NP_001193044.1  calcium-binding protein 8

    See identical proteins and their annotated locations for NP_001193044.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000025
    UniProtKB/TrEMBL
    E1BDZ7
    Related
    ENSBTAP00000098342.1, ENSBTAT00000118565.1
    Conserved Domains (2) summary
    cd00051
    Location:82143
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:83143
    EF-hand_7; EF-hand domain pair

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    28636197..29098356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005224934.5XP_005224991.1  calcium-binding protein 8 isoform X1

    See identical proteins and their annotated locations for XP_005224991.1

    Conserved Domains (1) summary
    PTZ00184
    Location:32142
    PTZ00184; calmodulin; Provisional
  2. XM_059881397.1XP_059737380.1  calcium-binding protein 8 isoform X1