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RIN2 Ras and Rab interactor 2 [ Bos taurus (cattle) ]

Gene ID: 537459, updated on 3-Apr-2024

Summary

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Official Symbol
RIN2provided by VGNC
Official Full Name
Ras and Rab interactor 2provided by VGNC
Primary source
VGNC:VGNC:33976
See related
Ensembl:ENSBTAG00000020382
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See RIN2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (39365356..39573520)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101905154 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene spermatogenesis-associated serine-rich protein 2-like Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC101905046 Neighboring gene microRNA mir-2305 Neighboring gene N-alpha-acetyltransferase 20, NatB catalytic subunit Neighboring gene crooked neck pre-mRNA splicing factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC152020

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras and Rab interactor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102204.1 → NP_001095674.1  ras and Rab interactor 2

    See identical proteins and their annotated locations for NP_001095674.1

    Status: PROVISIONAL

    Source sequence(s)
    BC149030
    UniProtKB/TrEMBL
    A6QNW1, E1B810
    Conserved Domains (3) summary
    smart00167
    Location:662 → 780
    VPS9; Domain present in VPS9
    cd01776
    Location:804 → 890
    Rin1_RA; Ubiquitin domain of RIN1 RAS effector
    cd10394
    Location:86 → 185
    SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    39365356..39573520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025000743.2 → XP_024856511.1  ras and Rab interactor 2 isoform X5

    UniProtKB/TrEMBL
    E1B810
    Conserved Domains (3) summary
    smart00167
    Location:705 → 823
    VPS9; Domain present in VPS9
    cd01776
    Location:847 → 933
    Rin1_RA; Ubiquitin domain of RIN1 RAS effector
    cl15255
    Location:113 → 228
    SH2; Src homology 2 (SH2) domain

  2. XM_025000742.2 → XP_024856510.1  ras and Rab interactor 2 isoform X5

    UniProtKB/TrEMBL
    E1B810
    Conserved Domains (3) summary
    smart00167
    Location:705 → 823
    VPS9; Domain present in VPS9
    cd01776
    Location:847 → 933
    Rin1_RA; Ubiquitin domain of RIN1 RAS effector
    cl15255
    Location:113 → 228
    SH2; Src homology 2 (SH2) domain

  3. XM_059892716.1 → XP_059748699.1  ras and Rab interactor 2 isoform X5

  4. XM_025000741.2 → XP_024856509.1  ras and Rab interactor 2 isoform X5

    UniProtKB/TrEMBL
    E1B810
    Conserved Domains (3) summary
    smart00167
    Location:705 → 823
    VPS9; Domain present in VPS9
    cd01776
    Location:847 → 933
    Rin1_RA; Ubiquitin domain of RIN1 RAS effector
    cl15255
    Location:113 → 228
    SH2; Src homology 2 (SH2) domain

  5. XM_059892714.1 → XP_059748697.1  ras and Rab interactor 2 isoform X1

  6. XM_059892715.1 → XP_059748698.1  ras and Rab interactor 2 isoform X2

  7. XM_025000739.2 → XP_024856507.2  ras and Rab interactor 2 isoform X3

  8. XM_025000751.2 → XP_024856519.1  ras and Rab interactor 2 isoform X7

    UniProtKB/TrEMBL
    E1B810
    Conserved Domains (3) summary
    smart00167
    Location:667 → 785
    VPS9; Domain present in VPS9
    cd01776
    Location:809 → 895
    Rin1_RA; Ubiquitin domain of RIN1 RAS effector
    cl15255
    Location:75 → 190
    SH2; Src homology 2 (SH2) domain

  9. XM_025000740.2 → XP_024856508.2  ras and Rab interactor 2 isoform X4

    Related
    ENSBTAP00000057580.2, ENSBTAT00000079606.2

  10. XM_025000746.2 → XP_024856514.1  ras and Rab interactor 2 isoform X5

    UniProtKB/TrEMBL
    E1B810
    Conserved Domains (3) summary
    smart00167
    Location:705 → 823
    VPS9; Domain present in VPS9
    cd01776
    Location:847 → 933
    Rin1_RA; Ubiquitin domain of RIN1 RAS effector
    cl15255
    Location:113 → 228
    SH2; Src homology 2 (SH2) domain

  11. XM_025000745.2 → XP_024856513.1  ras and Rab interactor 2 isoform X5

    UniProtKB/TrEMBL
    E1B810
    Conserved Domains (3) summary
    smart00167
    Location:705 → 823
    VPS9; Domain present in VPS9
    cd01776
    Location:847 → 933
    Rin1_RA; Ubiquitin domain of RIN1 RAS effector
    cl15255
    Location:113 → 228
    SH2; Src homology 2 (SH2) domain

  12. XM_025000750.2 → XP_024856518.1  ras and Rab interactor 2 isoform X6

    UniProtKB/TrEMBL
    E1B810
    Conserved Domains (3) summary
    smart00167
    Location:678 → 796
    VPS9; Domain present in VPS9
    cd01776
    Location:820 → 906
    Rin1_RA; Ubiquitin domain of RIN1 RAS effector
    cl15255
    Location:86 → 201
    SH2; Src homology 2 (SH2) domain

  13. XM_025000753.2 → XP_024856521.1  ras and Rab interactor 2 isoform X8

    UniProtKB/TrEMBL
    E1B810
    Conserved Domains (3) summary
    smart00167
    Location:660 → 778
    VPS9; Domain present in VPS9
    cd01776
    Location:802 → 888
    Rin1_RA; Ubiquitin domain of RIN1 RAS effector
    cl15255
    Location:68 → 183
    SH2; Src homology 2 (SH2) domain

  14. XM_059892717.1 → XP_059748700.1  ras and Rab interactor 2 isoform X9

    Related
    ENSBTAP00000051776.4, ENSBTAT00000056271.4

  15. XM_025000754.2 → XP_024856522.1  ras and Rab interactor 2 isoform X8

    UniProtKB/TrEMBL
    E1B810
    Conserved Domains (3) summary
    smart00167
    Location:660 → 778
    VPS9; Domain present in VPS9
    cd01776
    Location:802 → 888
    Rin1_RA; Ubiquitin domain of RIN1 RAS effector
    cl15255
    Location:68 → 183
    SH2; Src homology 2 (SH2) domain
Nucleotide Protein Strain
Heading Accession and Version

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