YBX3 Y-box binding protein 3 [Bos taurus (cattle)] - Gene

Summary

Official Symbol: YBX3provided by VGNC
Official Full Name: Y-box binding protein 3provided by VGNC
Primary source: VGNC:VGNC:37018
See related: BGD:BT15794; Ensembl:ENSBTAG00000009663
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as: CSDA
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	5	NC_037332.1 (98853392..98879065)

Chromosome 5 - NC_037332.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

ha2919 (e-PCR)
- UniSTS:515610

IB391 (e-PCR)
- UniSTS:20001

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of gene expression	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: Y-box-binding protein 3

Names: Y-box protein; cold shock domain protein A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001098074.1 → NP_001091543.1 Y-box-binding protein 3

See identical proteins and their annotated locations for NP_001091543.1

Status: PROVISIONAL

Source sequence(s)

BC140644

UniProtKB/TrEMBL

A5D7Q4, F6PS38

Conserved Domains (1) summary

pfam00313
Location:97 → 166

CSD; 'Cold-shock' DNA-binding domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

Range

98853392..98879065

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_010805489.2 → XP_010803791.1 Y-box-binding protein 3 isoform X1

UniProtKB/TrEMBL

A0A3Q1LIJ0, A0A3Q1M1B2

Related

ENSBTAP00000063490.1, ENSBTAT00000074030.2

Conserved Domains (1) summary

pfam00313
Location:195 → 264

CSD; 'Cold-shock' DNA-binding domain
XM_010805490.2 → XP_010803792.1 Y-box-binding protein 3 isoform X3

Conserved Domains (1) summary

pfam00313
Location:195 → 264

CSD; 'Cold-shock' DNA-binding domain
XM_059886527.1 → XP_059742510.1 Y-box-binding protein 3 isoform X2