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RNF130 ring finger protein 130 [ Bos taurus (cattle) ]

Gene ID: 525735, updated on 3-Apr-2024

Summary

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Official Symbol
RNF130provided by VGNC
Official Full Name
ring finger protein 130provided by VGNC
Primary source
VGNC:VGNC:34021
See related
BGD:BT20402; Ensembl:ENSBTAG00000004856
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (1184340..1327869)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene RasGEF domain family member 1C Neighboring gene large ribosomal subunit protein eL21-like Neighboring gene zinc finger CCHC domain-containing protein 9-like Neighboring gene mitochondrial import inner membrane translocase subunit Tim17-B-like Neighboring gene microRNA mir-340 Neighboring gene uncharacterized LOC107132589 Neighboring gene TBC1 domain family member 9B Neighboring gene MRN complex interacting protein Neighboring gene sequestosome 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF130
NP_001093178.1
XP_059744196.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001099708.1 → NP_001093178.1  E3 ubiquitin-protein ligase RNF130 precursor

    See identical proteins and their annotated locations for NP_001093178.1

    Status: PROVISIONAL

    Source sequence(s)
    BC142200
    UniProtKB/TrEMBL
    A0A3Q1N7D4, A5PJQ3, F1MIY9
    Related
    ENSBTAP00000006384.7, ENSBTAT00000006384.7
    Conserved Domains (3) summary
    COG5243
    Location:197 → 306
    HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
    cd02122
    Location:40 → 179
    PA_GRAIL_like; PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like. This group includes PA domain containing E3 (ubiquitin ligases) similar to human GRAIL (gene related to anergy in lymphocytes) protein. Proteins in this group contain a C3H2C3 RING finger. E3 ...
    cd16803
    Location:262 → 310
    RING-H2_RNF130; RING finger, H2 subclass, found in RING finger protein 130 (RNF130) and similar proteins

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    1184340..1327869
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059888213.1 → XP_059744196.1  E3 ubiquitin-protein ligase RNF130 isoform X1

    Related
    ENSBTAP00000073712.2, ENSBTAT00000076699.2
Nucleotide Protein Strain
Heading Accession and Version

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