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PARP9 poly(ADP-ribose) polymerase family member 9 [ Bos taurus (cattle) ]

Gene ID: 510532, updated on 3-Apr-2024

Summary

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Official Symbol
PARP9provided by VGNC
Official Full Name
poly(ADP-ribose) polymerase family member 9provided by VGNC
Primary source
VGNC:VGNC:53596
See related
BGD:BT22236; Ensembl:ENSBTAG00000021791
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See PARP9 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (66958506..66988365, complement)

Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 5B Neighboring gene karyopherin subunit alpha 1 Neighboring gene U6 spliceosomal RNA Neighboring gene deltex E3 ubiquitin ligase 3L Neighboring gene poly(ADP-ribose) polymerase family member 14 Neighboring gene HSPB1 associated protein 1 Neighboring gene solute carrier family 49 member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC143374

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-like protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of type II interferon-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein mono-ADP-ribosyltransferase PARP9
NP_001070296.1
XP_005201452.1
XP_024834505.1
XP_024834526.1
XP_024834620.1
XP_059733742.1
XP_059733772.1
XP_059733799.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076828.1 → NP_001070296.1  protein mono-ADP-ribosyltransferase PARP9

    See identical proteins and their annotated locations for NP_001070296.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123641
    UniProtKB/TrEMBL
    F6R6Y8, Q08DN9
    Related
    ENSBTAP00000102061.1, ENSBTAT00000108464.1
    Conserved Domains (3) summary
    cd01439
    Location:669 → 788
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    cd02907
    Location:82 → 261
    Macro_Af1521_BAL_like; Macro domain, Af1521- and BAL-like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose ...
    cl00019
    Location:287 → 425
    Macro; Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    66958506..66988365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024978758.2 → XP_024834526.1  protein mono-ADP-ribosyltransferase PARP9 isoform X1

    UniProtKB/TrEMBL
    F6R6Y8
    Conserved Domains (3) summary
    cd01439
    Location:705 → 824
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    cd02907
    Location:118 → 297
    Macro_Af1521_BAL_like; Macro domain, Af1521- and BAL-like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose ...
    cl00019
    Location:323 → 461
    Macro; Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ...

  2. XM_005201395.4 → XP_005201452.1  protein mono-ADP-ribosyltransferase PARP9 isoform X1

    UniProtKB/TrEMBL
    F6R6Y8
    Related
    ENSBTAP00000029045.6, ENSBTAT00000029045.6
    Conserved Domains (3) summary
    cd01439
    Location:705 → 824
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    cd02907
    Location:118 → 297
    Macro_Af1521_BAL_like; Macro domain, Af1521- and BAL-like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose ...
    cl00019
    Location:323 → 461
    Macro; Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ...

  3. XM_024978737.2 → XP_024834505.1  protein mono-ADP-ribosyltransferase PARP9 isoform X1

    UniProtKB/TrEMBL
    F6R6Y8
    Conserved Domains (3) summary
    cd01439
    Location:705 → 824
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    cd02907
    Location:118 → 297
    Macro_Af1521_BAL_like; Macro domain, Af1521- and BAL-like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose ...
    cl00019
    Location:323 → 461
    Macro; Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ...

  4. XM_024978852.2 → XP_024834620.1  protein mono-ADP-ribosyltransferase PARP9 isoform X2

    UniProtKB/TrEMBL
    F6R6Y8, Q08DN9
    Conserved Domains (3) summary
    cd01439
    Location:669 → 788
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    cd02907
    Location:82 → 261
    Macro_Af1521_BAL_like; Macro domain, Af1521- and BAL-like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose ...
    cl00019
    Location:287 → 425
    Macro; Macro domain, a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ...

  5. XM_059877759.1 → XP_059733742.1  protein mono-ADP-ribosyltransferase PARP9 isoform X1

  6. XM_059877789.1 → XP_059733772.1  protein mono-ADP-ribosyltransferase PARP9 isoform X1

  7. XM_059877816.1 → XP_059733799.1  protein mono-ADP-ribosyltransferase PARP9 isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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