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ZNHIT6 zinc finger HIT-type containing 6 [ Bos taurus (cattle) ]

Gene ID: 505578, updated on 5-Mar-2024

Summary

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Official Symbol
ZNHIT6provided by VGNC
Official Full Name
zinc finger HIT-type containing 6provided by VGNC
Primary source
VGNC:VGNC:37361
See related
BGD:BT19192; Ensembl:ENSBTAG00000021051
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
C3H1ORF181
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (58374440..58436292)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene collagen type XXIV alpha 1 chain Neighboring gene uncharacterized LOC132344885 Neighboring gene transcription factor Spi-C-like Neighboring gene uncharacterized LOC101904498 Neighboring gene uncharacterized LOC101904769 Neighboring gene cellular communication network factor 1 Neighboring gene DDB1- and CUL4-associated factor 16-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in box C/D snoRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snoRNA localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of pre-snoRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
box C/D snoRNA protein 1
Names
zinc finger, HIT type 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    58374440..58436292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002686285.7 → XP_002686331.1  box C/D snoRNA protein 1

    See identical proteins and their annotated locations for XP_002686331.1

    UniProtKB/TrEMBL
    A0A3Q1LV20, F1MYH0
    Related
    ENSBTAP00000101765.1, ENSBTAT00000101944.1
    Conserved Domains (1) summary
    pfam04438
    Location:217 → 246
    zf-HIT; HIT zinc finger
Nucleotide Protein Strain
Heading Accession and Version

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