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PRRC2B proline rich coiled-coil 2B [ Bos taurus (cattle) ]

Gene ID: 505073, updated on 3-Apr-2024

Summary

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Official Symbol
PRRC2Bprovided by VGNC
Official Full Name
proline rich coiled-coil 2Bprovided by VGNC
Primary source
VGNC:VGNC:33405
See related
Ensembl:ENSBTAG00000004400
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
BAT2L; BAT2L1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (101537148..101621562)

Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 78 member A Neighboring gene phospholipid phosphatase 7 (inactive) Neighboring gene small nucleolar RNA SNORD62 Neighboring gene small nucleolar RNA SNORD62 Neighboring gene protein O-mannosyltransferase 1 Neighboring gene uridine-cytidine kinase 1 Neighboring gene proline rich transmembrane protein 1B Neighboring gene Rap guanine nucleotide exchange factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein PRRC2B
Names
HLA-B associated transcript 2-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    101537148..101621562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024999593.2 → XP_024855361.1  protein PRRC2B isoform X1

    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  2. XM_024999601.2 → XP_024855369.1  protein PRRC2B isoform X9

    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  3. XM_024999598.2 → XP_024855366.1  protein PRRC2B isoform X5

    UniProtKB/TrEMBL
    E1BGB2
    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  4. XM_024999602.2 → XP_024855370.1  protein PRRC2B isoform X10

    Related
    ENSBTAP00000010939.6, ENSBTAT00000010939.7
    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  5. XM_024999596.2 → XP_024855364.1  protein PRRC2B isoform X3

    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  6. XM_024999600.2 → XP_024855368.1  protein PRRC2B isoform X7

    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  7. XM_024999595.2 → XP_024855363.1  protein PRRC2B isoform X2

    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  8. XM_024999599.2 → XP_024855367.1  protein PRRC2B isoform X6

    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  9. XM_024999606.2 → XP_024855374.1  protein PRRC2B isoform X8

    Related
    ENSBTAP00000074970.1, ENSBTAT00000127899.1
    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  10. XM_059891856.1 → XP_059747839.1  protein PRRC2B isoform X11

  11. XM_059891857.1 → XP_059747840.1  protein PRRC2B isoform X15

    Related
    ENSBTAP00000062532.2, ENSBTAT00000074914.2

  12. XM_024999597.2 → XP_024855365.1  protein PRRC2B isoform X4

    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  13. XM_024999594.2 → XP_024855362.1  protein PRRC2B isoform X1

    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  14. XM_024999604.2 → XP_024855372.1  protein PRRC2B isoform X13

    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  15. XM_024999605.2 → XP_024855373.1  protein PRRC2B isoform X14

    Conserved Domains (1) summary
    pfam07001
    Location:1 → 189
    BAT2_N; BAT2 N-terminus

  16. XM_010810520.4 → XP_010808822.1  protein PRRC2B isoform X12

Nucleotide Protein Strain
Heading Accession and Version

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