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NCKAP1L NCK associated protein 1 like [ Canis lupus familiaris (dog) ]

Gene ID: 486492, updated on 5-Mar-2024

Summary

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Official Symbol
NCKAP1Lprovided by VGNC
Official Full Name
NCK associated protein 1 likeprovided by VGNC
Primary source
VGNC:VGNC:49906
See related
Ensembl:ENSCAFG00845016220
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 27
Exon count:
34
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (802738..856041, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (45396099..45449340)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (45799997..45853537)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (795107..848346, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (803528..857308, complement)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 1A Neighboring gene phosphodiesterase 1B Neighboring gene gametocyte specific factor 2 Neighboring gene gametocyte specific factor 1 Neighboring gene basic proline-rich protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell projection assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cortical actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCAR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nck-associated protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    802738..856041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038437973.1 → XP_038293901.1  nck-associated protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0L9X9, A0A8C0T363, A0A8I3S205
    Related
    ENSCAFP00845022715.1, ENSCAFT00845028870.1
    Conserved Domains (1) summary
    pfam09735
    Location:11 → 1122
    Nckap1; Membrane-associated apoptosis protein

  2. XM_038437974.1 → XP_038293902.1  nck-associated protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0L9X9, A0A8C0T363, A0A8I3S205
    Conserved Domains (1) summary
    pfam09735
    Location:11 → 1122
    Nckap1; Membrane-associated apoptosis protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    795107..848346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038512678.1 → XP_038368606.1  nck-associated protein 1-like isoform X1

    Conserved Domains (1) summary
    pfam09735
    Location:11 → 1122
    Nckap1; Membrane-associated apoptosis protein

  2. XM_038512679.1 → XP_038368607.1  nck-associated protein 1-like isoform X1

    Conserved Domains (1) summary
    pfam09735
    Location:11 → 1122
    Nckap1; Membrane-associated apoptosis protein

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    803528..857308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038640428.1 → XP_038496356.1  nck-associated protein 1-like isoform X1

    Conserved Domains (1) summary
    pfam09735
    Location:11 → 1122
    Nckap1; Membrane-associated apoptosis protein

  2. XM_038640429.1 → XP_038496357.1  nck-associated protein 1-like isoform X1

    Conserved Domains (1) summary
    pfam09735
    Location:11 → 1122
    Nckap1; Membrane-associated apoptosis protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    45799997..45853537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038577864.1 → XP_038433792.1  nck-associated protein 1-like isoform X2

    UniProtKB/TrEMBL
    A0A8C0L9X9

  2. XM_038577865.1 → XP_038433793.1  nck-associated protein 1-like isoform X2

    UniProtKB/TrEMBL
    A0A8C0L9X9

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    45396099..45449340
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005636738.3 → XP_005636795.1  nck-associated protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0L9X9, A0A8C0T363, A0A8I3S205
    Conserved Domains (1) summary
    pfam09735
    Location:11 → 1122
    Nckap1; Membrane-associated apoptosis protein

  2. XM_022411040.2 → XP_022266748.1  nck-associated protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0L9X9, A0A8C0T363, A0A8I3S205
    Conserved Domains (1) summary
    pfam09735
    Location:11 → 1122
    Nckap1; Membrane-associated apoptosis protein
Nucleotide Protein
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