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TBC1D16 TBC1 domain family member 16 [ Canis lupus familiaris (dog) ]

Gene ID: 483350, updated on 5-Mar-2024

Summary

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Official Symbol
TBC1D16provided by VGNC
Official Full Name
TBC1 domain family member 16provided by VGNC
Primary source
VGNC:VGNC:47135
See related
Ensembl:ENSCAFG00845013687
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (2288208..2365455)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (2295887..2373088)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (2518344..2595547)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (2312517..2388868)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (2437017..2514188)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene dual specificity protein phosphatase 5-like Neighboring gene alpha glucosidase Neighboring gene coiled-coil domain 40 molecular ruler complex subunit Neighboring gene uncharacterized LOC119873401 Neighboring gene uncharacterized LOC111097518

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TBC1 domain family member 16; LOW QUALITY PROTEIN: TBC1 domain family member 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    2288208..2365455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038675502.1 → XP_038531430.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Related
    ENSCAFP00845019300.1, ENSCAFT00845024540.1
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  2. XM_038675501.1 → XP_038531429.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  3. XM_038675504.1 → XP_038531432.1  TBC1 domain family member 16 isoform X2

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:431 → 659
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  4. XM_038675505.1 → XP_038531433.1  TBC1 domain family member 16 isoform X3

    UniProtKB/TrEMBL
    A0A8C0M8P2, A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:420 → 648
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 263
    PHA03307; transcriptional regulator ICP4; Provisional

  5. XM_038675506.1 → XP_038531434.1  TBC1 domain family member 16 isoform X4

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:419 → 647
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 263
    PHA03307; transcriptional regulator ICP4; Provisional

  6. XM_038675507.1 → XP_038531435.1  TBC1 domain family member 16 isoform X5

    UniProtKB/TrEMBL
    A0A8I3NS42, A0A8P0PAY8
    Related
    ENSCAFP00845019343.1, ENSCAFT00845024589.1
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  7. XM_038675508.1 → XP_038531436.1  TBC1 domain family member 16 isoform X5

    UniProtKB/TrEMBL
    A0A8I3NS42, A0A8P0PAY8
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  8. XM_038675503.1 → XP_038531431.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Related
    ENSCAFP00845019361.1, ENSCAFT00845024615.1
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  9. XM_038675510.1 → XP_038531438.1  TBC1 domain family member 16 isoform X7

    UniProtKB/TrEMBL
    A0A8C0Q3M7, A0A8I3P153
    Related
    ENSCAFP00845019504.1, ENSCAFT00845024797.1
    Conserved Domains (1) summary
    smart00164
    Location:62 → 290
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  10. XM_038675509.1 → XP_038531437.1  TBC1 domain family member 16 isoform X6

    Conserved Domains (1) summary
    smart00164
    Location:63 → 291
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

RNA

  1. XR_005431859.1 RNA Sequence

  2. XR_005431860.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    2312517..2388868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038484729.1 → XP_038340657.1  LOW QUALITY PROTEIN: TBC1 domain family member 16 isoform X4

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    2437017..2514188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038610386.1 → XP_038466314.1  TBC1 domain family member 16 isoform X1

    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  2. XM_038610385.1 → XP_038466313.1  TBC1 domain family member 16 isoform X1

    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  3. XM_038610388.1 → XP_038466316.1  TBC1 domain family member 16 isoform X2

    Conserved Domains (2) summary
    smart00164
    Location:431 → 659
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  4. XM_038610389.1 → XP_038466317.1  TBC1 domain family member 16 isoform X3

    Conserved Domains (2) summary
    smart00164
    Location:420 → 648
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 263
    PHA03307; transcriptional regulator ICP4; Provisional

  5. XM_038610390.1 → XP_038466318.1  TBC1 domain family member 16 isoform X4

    Conserved Domains (2) summary
    smart00164
    Location:419 → 647
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 263
    PHA03307; transcriptional regulator ICP4; Provisional

  6. XM_038610391.1 → XP_038466319.1  TBC1 domain family member 16 isoform X5

    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  7. XM_038610392.1 → XP_038466320.1  TBC1 domain family member 16 isoform X5

    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  8. XM_038610387.1 → XP_038466315.1  TBC1 domain family member 16 isoform X1

    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  9. XM_038610394.1 → XP_038466322.1  TBC1 domain family member 16 isoform X7

    Conserved Domains (1) summary
    smart00164
    Location:62 → 290
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  10. XM_038610393.1 → XP_038466321.1  TBC1 domain family member 16 isoform X6

    Conserved Domains (1) summary
    smart00164
    Location:63 → 291
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

RNA

  1. XR_005398564.1 RNA Sequence

  2. XR_005398565.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    2518344..2595547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038546379.1 → XP_038402307.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  2. XM_038546378.1 → XP_038402306.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  3. XM_038546381.1 → XP_038402309.1  TBC1 domain family member 16 isoform X2

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:431 → 659
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  4. XM_038546382.1 → XP_038402310.1  TBC1 domain family member 16 isoform X3

    UniProtKB/TrEMBL
    A0A8C0M8P2, A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:420 → 648
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 263
    PHA03307; transcriptional regulator ICP4; Provisional

  5. XM_038546383.1 → XP_038402311.1  TBC1 domain family member 16 isoform X4

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:419 → 647
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 263
    PHA03307; transcriptional regulator ICP4; Provisional

  6. XM_038546384.1 → XP_038402312.1  TBC1 domain family member 16 isoform X5

    UniProtKB/TrEMBL
    A0A8I3NS42, A0A8P0PAY8
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  7. XM_038546385.1 → XP_038402313.1  TBC1 domain family member 16 isoform X5

    UniProtKB/TrEMBL
    A0A8I3NS42, A0A8P0PAY8
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  8. XM_038546380.1 → XP_038402308.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  9. XM_038546387.1 → XP_038402315.1  TBC1 domain family member 16 isoform X7

    UniProtKB/TrEMBL
    A0A8C0Q3M7, A0A8I3P153
    Conserved Domains (1) summary
    smart00164
    Location:62 → 290
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  10. XM_038546386.1 → XP_038402314.1  TBC1 domain family member 16 isoform X6

    Conserved Domains (1) summary
    smart00164
    Location:63 → 291
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

RNA

  1. XR_005364134.1 RNA Sequence

  2. XR_005364135.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    2295887..2373088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022422644.2 → XP_022278352.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  2. XM_005624025.4 → XP_005624082.1  TBC1 domain family member 16 isoform X1

    See identical proteins and their annotated locations for XP_005624082.1

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  3. XM_038623836.1 → XP_038479764.1  TBC1 domain family member 16 isoform X2

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:431 → 659
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  4. XM_038623842.1 → XP_038479770.1  TBC1 domain family member 16 isoform X3

    UniProtKB/TrEMBL
    A0A8C0M8P2, A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:420 → 648
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 263
    PHA03307; transcriptional regulator ICP4; Provisional

  5. XM_038623847.1 → XP_038479775.1  TBC1 domain family member 16 isoform X4

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:419 → 647
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 263
    PHA03307; transcriptional regulator ICP4; Provisional

  6. XM_038623855.1 → XP_038479783.1  TBC1 domain family member 16 isoform X5

    UniProtKB/TrEMBL
    A0A8I3NS42, A0A8P0PAY8
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  7. XM_038623859.1 → XP_038479787.1  TBC1 domain family member 16 isoform X5

    UniProtKB/TrEMBL
    A0A8I3NS42, A0A8P0PAY8
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  8. XM_038623818.1 → XP_038479746.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8I3S0C5, A0A8P0P7F6
    Conserved Domains (2) summary
    smart00164
    Location:432 → 660
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    PHA03307
    Location:99 → 276
    PHA03307; transcriptional regulator ICP4; Provisional

  9. XM_022422651.2 → XP_022278359.1  TBC1 domain family member 16 isoform X7

    UniProtKB/TrEMBL
    A0A8C0Q3M7, A0A8I3P153
    Conserved Domains (1) summary
    smart00164
    Location:62 → 290
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  10. XM_022422650.2 → XP_022278358.1  TBC1 domain family member 16 isoform X6

    Conserved Domains (1) summary
    smart00164
    Location:63 → 291
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

RNA

  1. XR_005405488.1 RNA Sequence

  2. XR_005405489.1 RNA Sequence

Nucleotide Protein
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