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SPATS2L spermatogenesis associated serine rich 2 like [ Canis lupus familiaris (dog) ]

Gene ID: 478862, updated on 5-Mar-2024

Summary

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Official Symbol
SPATS2Lprovided by VGNC
Official Full Name
spermatogenesis associated serine rich 2 likeprovided by VGNC
Primary source
VGNC:VGNC:46722
See related
Ensembl:ENSCAFG00845028292
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 37
Exon count:
18
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 37 NC_051841.1 (9302927..9463742)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 37 NC_006619.4 (10290333..10451092)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 37 NC_049258.1 (9261759..9422544)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 37 NC_049297.1 (9291451..9451900)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 37 NC_049778.1 (9263345..9424308)

Chromosome 37 - NC_051841.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111094429 Neighboring gene uncharacterized LOC111094427 Neighboring gene uncharacterized LOC119867930 Neighboring gene uncharacterized LOC119867931 Neighboring gene uncharacterized LOC119867929 Neighboring gene potassium channel tetramerization domain containing 18 Neighboring gene shugoshin 2 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SPATS2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051841.1 Reference ROS_Cfam_1.0

    Range
    9302927..9463742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038447537.1 → XP_038303465.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  2. XM_038447538.1 → XP_038303466.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  3. XM_038447530.1 → XP_038303458.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Related
    ENSCAFP00845039246.1, ENSCAFT00845050052.1
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  4. XM_038447532.1 → XP_038303460.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  5. XM_038447531.1 → XP_038303459.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  6. XM_038447539.1 → XP_038303467.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  7. XM_038447536.1 → XP_038303464.1  SPATS2-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0T8X8
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  8. XM_038447535.1 → XP_038303463.1  SPATS2-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0JVB6, A0A8C0MW91, A0A8C0T8K0, A0A8I3QGE6, A0A8I3S6Q2
    Related
    ENSCAFP00845039296.1, ENSCAFT00845050116.1
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 299
    DUF1387; Protein of unknown function (DUF1387)

  9. XM_038447534.1 → XP_038303462.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Related
    ENSCAFP00845039335.1, ENSCAFT00845050167.1
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  10. XM_038447533.1 → XP_038303461.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049297.1 Alternate UMICH_Zoey_3.1

    Range
    9291451..9451900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038521590.1 → XP_038377518.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  2. XM_038521595.1 → XP_038377523.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  3. XM_038521588.1 → XP_038377516.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  4. XM_038521591.1 → XP_038377519.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  5. XM_038521589.1 → XP_038377517.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  6. XM_038521597.1 → XP_038377525.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  7. XM_038521596.1 → XP_038377524.1  SPATS2-like protein isoform X3

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  8. XM_038521594.1 → XP_038377522.1  SPATS2-like protein isoform X2

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 299
    DUF1387; Protein of unknown function (DUF1387)

  9. XM_038521593.1 → XP_038377521.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  10. XM_038521592.1 → XP_038377520.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049778.1 Alternate UNSW_CanFamBas_1.0

    Range
    9263345..9424308
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038649696.1 → XP_038505624.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  2. XM_038649697.1 → XP_038505625.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  3. XM_038649689.1 → XP_038505617.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  4. XM_038649691.1 → XP_038505619.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  5. XM_038649690.1 → XP_038505618.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  6. XM_038649698.1 → XP_038505626.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  7. XM_038649695.1 → XP_038505623.1  SPATS2-like protein isoform X3

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  8. XM_038649694.1 → XP_038505622.1  SPATS2-like protein isoform X2

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 299
    DUF1387; Protein of unknown function (DUF1387)

  9. XM_038649693.1 → XP_038505621.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  10. XM_038649692.1 → XP_038505620.1  SPATS2-like protein isoform X1

    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049258.1 Alternate UU_Cfam_GSD_1.0

    Range
    9261759..9422544
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038585290.1 → XP_038441218.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  2. XM_038585291.1 → XP_038441219.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  3. XM_038585283.1 → XP_038441211.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  4. XM_038585285.1 → XP_038441213.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  5. XM_038585284.1 → XP_038441212.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  6. XM_038585292.1 → XP_038441220.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  7. XM_038585289.1 → XP_038441217.1  SPATS2-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0T8X8
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  8. XM_038585288.1 → XP_038441216.1  SPATS2-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0JVB6, A0A8C0MW91, A0A8C0T8K0, A0A8I3QGE6, A0A8I3S6Q2
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 299
    DUF1387; Protein of unknown function (DUF1387)

  9. XM_038585287.1 → XP_038441215.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  10. XM_038585286.1 → XP_038441214.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006619.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    10290333..10451092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022415228.2 → XP_022270936.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  2. XM_022415230.2 → XP_022270938.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  3. XM_038463774.1 → XP_038319702.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  4. XM_038463776.1 → XP_038319704.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  5. XM_038463775.1 → XP_038319703.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  6. XM_038463779.1 → XP_038319707.1  SPATS2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  7. XM_038463778.1 → XP_038319706.1  SPATS2-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0T8X8
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  8. XM_038463777.1 → XP_038319705.1  SPATS2-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0JVB6, A0A8C0MW91, A0A8C0T8K0, A0A8I3QGE6, A0A8I3S6Q2
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 299
    DUF1387; Protein of unknown function (DUF1387)

  9. XM_005640508.3 → XP_005640565.1  SPATS2-like protein isoform X1

    See identical proteins and their annotated locations for XP_005640565.1

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)

  10. XM_536022.7 → XP_536022.2  SPATS2-like protein isoform X1

    See identical proteins and their annotated locations for XP_536022.2

    UniProtKB/TrEMBL
    A0A8C0JU02, A0A8C0T8K0, A0A8I3PW51, A0A8I3S6Q2, A0A8P0SZ23
    Conserved Domains (1) summary
    pfam07139
    Location:59 → 368
    DUF1387; Protein of unknown function (DUF1387)
Nucleotide Protein
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