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RFC3 replication factor C subunit 3 [ Canis lupus familiaris (dog) ]

Gene ID: 477308, updated on 5-Mar-2024

Summary

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Official Symbol
RFC3provided by VGNC
Official Full Name
replication factor C subunit 3provided by VGNC
Primary source
VGNC:VGNC:45494
See related
Ensembl:ENSCAFG00845029383
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (6579163..6596225, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (6506544..6523599, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (6533902..6550961, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (6477994..6495070, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (6469836..6486897, complement)

Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene fasciculation and elongation protein zeta-1-like Neighboring gene uncharacterized LOC111092447 Neighboring gene uncharacterized LOC111092275 Neighboring gene StAR related lipid transfer domain containing 13 Neighboring gene uncharacterized LOC102153473

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA clamp loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA replication factor C complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
replication factor C subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051829.1 Reference ROS_Cfam_1.0

    Range
    6579163..6596225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038434863.1 → XP_038290791.1  replication factor C subunit 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LC09, A0A8C0SRC2, A0A8I3Q6A8
    Related
    ENSCAFP00845040806.1, ENSCAFT00845052013.1
    Conserved Domains (1) summary
    PRK12402
    Location:3 → 339
    PRK12402; replication factor C small subunit 2; Reviewed

  2. XM_038434865.1 → XP_038290793.1  replication factor C subunit 3 isoform X2

    Conserved Domains (1) summary
    PRK12402
    Location:76 → 287
    PRK12402; replication factor C small subunit 2; Reviewed

  3. XM_038434864.1 → XP_038290792.1  replication factor C subunit 3 isoform X2

    Conserved Domains (1) summary
    PRK12402
    Location:76 → 287
    PRK12402; replication factor C small subunit 2; Reviewed

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049285.1 Alternate UMICH_Zoey_3.1

    Range
    6477994..6495070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038509849.1 → XP_038365777.1  replication factor C subunit 3 isoform X1

    Conserved Domains (1) summary
    PRK12402
    Location:3 → 339
    PRK12402; replication factor C small subunit 2; Reviewed

  2. XM_038509851.1 → XP_038365779.1  replication factor C subunit 3 isoform X2

    Conserved Domains (1) summary
    PRK12402
    Location:76 → 287
    PRK12402; replication factor C small subunit 2; Reviewed

  3. XM_038509850.1 → XP_038365778.1  replication factor C subunit 3 isoform X2

    Conserved Domains (1) summary
    PRK12402
    Location:76 → 287
    PRK12402; replication factor C small subunit 2; Reviewed

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

    Range
    6469836..6486897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038637564.1 → XP_038493492.1  replication factor C subunit 3 isoform X1

    Conserved Domains (1) summary
    PRK12402
    Location:3 → 339
    PRK12402; replication factor C small subunit 2; Reviewed

  2. XM_038637566.1 → XP_038493494.1  replication factor C subunit 3 isoform X2

    Conserved Domains (1) summary
    PRK12402
    Location:76 → 287
    PRK12402; replication factor C small subunit 2; Reviewed

  3. XM_038637565.1 → XP_038493493.1  replication factor C subunit 3 isoform X2

    Conserved Domains (1) summary
    PRK12402
    Location:76 → 287
    PRK12402; replication factor C small subunit 2; Reviewed

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

    Range
    6533902..6550961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038573303.1 → XP_038429231.1  replication factor C subunit 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LC09, A0A8C0SRC2, A0A8I3Q6A8
    Conserved Domains (1) summary
    PRK12402
    Location:3 → 339
    PRK12402; replication factor C small subunit 2; Reviewed

  2. XM_038573306.1 → XP_038429234.1  replication factor C subunit 3 isoform X2

    Conserved Domains (1) summary
    PRK12402
    Location:76 → 287
    PRK12402; replication factor C small subunit 2; Reviewed

  3. XM_038573305.1 → XP_038429233.1  replication factor C subunit 3 isoform X2

    Conserved Domains (1) summary
    PRK12402
    Location:76 → 287
    PRK12402; replication factor C small subunit 2; Reviewed

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    6506544..6523599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_534500.7 → XP_534500.3  replication factor C subunit 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LC09, A0A8C0SRC2, A0A8I3Q6A8
    Conserved Domains (1) summary
    PRK12402
    Location:3 → 339
    PRK12402; replication factor C small subunit 2; Reviewed

  2. XM_005635470.4 → XP_005635527.1  replication factor C subunit 3 isoform X2

    See identical proteins and their annotated locations for XP_005635527.1

    Conserved Domains (1) summary
    PRK12402
    Location:76 → 287
    PRK12402; replication factor C small subunit 2; Reviewed

  3. XM_005635469.3 → XP_005635526.1  replication factor C subunit 3 isoform X2

    See identical proteins and their annotated locations for XP_005635526.1

    Conserved Domains (1) summary
    PRK12402
    Location:76 → 287
    PRK12402; replication factor C small subunit 2; Reviewed
Nucleotide Protein
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