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SLC22A6 solute carrier family 22 member 6 [ Canis lupus familiaris (dog) ]

Gene ID: 476050, updated on 5-Mar-2024

Summary

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Official Symbol
SLC22A6provided by VGNC
Official Full Name
solute carrier family 22 member 6provided by VGNC
Primary source
VGNC:VGNC:46280
See related
Ensembl:ENSCAFG00845007241
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 18 NC_051822.1 (54782055..54789820)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 18 NC_006600.4 (52342543..52350303)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 18 NC_049239.1 (54245739..54253490)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 18 NC_049278.1 (53884029..53891784)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 18 NC_049759.1 (53458362..53466122)

Chromosome 18 - NC_051822.1Genomic Context describing neighboring genes Neighboring gene vasodilator-stimulated phosphoprotein-like Neighboring gene uncharacterized LOC102157191 Neighboring gene solute carrier family 22 member 8 Neighboring gene uncharacterized LOC119864276 Neighboring gene cholinergic receptor muscarinic 1 Neighboring gene solute carrier family 3 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sodium-independent organic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in organic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 22 member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051822.1 Reference ROS_Cfam_1.0

    Range
    54782055..54789820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038425260.1 → XP_038281188.1  solute carrier family 22 member 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KJV2, A0A8C0MLE3, A0A8C0SZD7, A0A8I3N270
    Related
    ENSCAFP00845009994.1, ENSCAFT00845012822.1
    Conserved Domains (1) summary
    TIGR00898
    Location:11 → 515
    2A0119; cation transport protein

  2. XM_038425261.1 → XP_038281189.1  solute carrier family 22 member 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C0MLE3
    Conserved Domains (1) summary
    TIGR00898
    Location:11 → 454
    2A0119; cation transport protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049278.1 Alternate UMICH_Zoey_3.1

    Range
    53884029..53891784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038501528.1 → XP_038357456.1  solute carrier family 22 member 6 isoform X1

    Conserved Domains (1) summary
    TIGR00898
    Location:11 → 515
    2A0119; cation transport protein

  2. XM_038501529.1 → XP_038357457.1  solute carrier family 22 member 6 isoform X2

    Conserved Domains (1) summary
    TIGR00898
    Location:11 → 454
    2A0119; cation transport protein

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049759.1 Alternate UNSW_CanFamBas_1.0

    Range
    53458362..53466122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038628355.1 → XP_038484283.1  solute carrier family 22 member 6 isoform X1

    Conserved Domains (1) summary
    TIGR00898
    Location:11 → 515
    2A0119; cation transport protein

  2. XM_038628356.1 → XP_038484284.1  solute carrier family 22 member 6 isoform X2

    Conserved Domains (1) summary
    TIGR00898
    Location:11 → 454
    2A0119; cation transport protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049239.1 Alternate UU_Cfam_GSD_1.0

    Range
    54245739..54253490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038564214.1 → XP_038420142.1  solute carrier family 22 member 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KJV2, A0A8C0MLE3, A0A8C0SZD7, A0A8I3N270
    Conserved Domains (1) summary
    TIGR00898
    Location:11 → 515
    2A0119; cation transport protein

  2. XM_038564216.1 → XP_038420144.1  solute carrier family 22 member 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C0MLE3
    Conserved Domains (1) summary
    TIGR00898
    Location:11 → 454
    2A0119; cation transport protein

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    52342543..52350303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_533258.7 → XP_533258.1  solute carrier family 22 member 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KJV2, A0A8C0MLE3, A0A8C0SZD7, A0A8I3N270
    Conserved Domains (1) summary
    TIGR00898
    Location:11 → 515
    2A0119; cation transport protein

  2. XM_038454151.1 → XP_038310079.1  solute carrier family 22 member 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C0MLE3
    Conserved Domains (1) summary
    TIGR00898
    Location:11 → 454
    2A0119; cation transport protein
Nucleotide Protein
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